RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 U3KQ87 197 aa7.87□□□□□ -1.15
GGA3-202ENST00000538886 ATMQ13315 3056 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.86□□□□□ -1.155e-7■■■■□ 20.8
GGA3-202ENST00000538886 TMEM72A0PK05 275 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 ALPLP05186 524 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 ZNF823P16415 610 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 C21orf33P30042 268 aaPredicted RBP7.86□□□□□ -1.15
GGA3-202ENST00000538886 MVDP53602 400 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 BAK1Q16611 211 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 TIMM50Q3ZCQ8 353 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 RPRMLQ8N4K4 120 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 SLC7A13Q8TCU3 470 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 C3orf49Q96BT1 292 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 SLC38A2Q96QD8 506 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 HHATLQ9HCP6 504 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 BCL2L10Q9HD36 194 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 ACOT13Q9NPJ3 140 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 HSPE1-MOB4S4R3N1 261 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 FAM183AA6NL82 134 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 M0R129 80 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 HPGDSO60760 199 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 AQP8O94778 261 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 PVALBP20472 110 aaPredicted RBP7.86□□□□□ -1.15
GGA3-202ENST00000538886 PTPN6P29350 595 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 CSNK1A1P48729 337 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 TGFBR3Q03167 851 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 SKP2Q13309 424 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 IL18Q14116 193 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 USF2Q15853 346 aaPredicted RBP7.86□□□□□ -1.15
GGA3-202ENST00000538886 ODF4Q2M2E3 257 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 LCN8Q6JVE9 175 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 B3GLCTQ6Y288 498 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 CMIPQ8IY22 773 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 ZFP62Q8NB50 900 aaPredicted RBP7.86□□□□□ -1.15
GGA3-202ENST00000538886 CLRN3Q8NCR9 226 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 TRMT61AQ96FX7 289 aaKnown RBP7.86□□□□□ -1.15
GGA3-202ENST00000538886 KATNB1Q9BVA0 655 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 REPIN1Q9BWE0 567 aaKnown RBP7.86□□□□□ -1.15
GGA3-202ENST00000538886 B3GAT2Q9NPZ5 323 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 BIN3Q9NQY0 253 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 SDHAF2Q9NX18 166 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 NKIRAS2Q9NYR9 191 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 DNAJB9Q9UBS3 223 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 TRAV36DV7A0A075B6V5 113 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 UNC119BA6NIH7 251 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 B4DXG7 233 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 RCBTB2O95199 551 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 RENP00797 406 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 IFNGP01579 166 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 MRPL3P09001 348 aaKnown RBP7.86□□□□□ -1.15
GGA3-202ENST00000538886 SLC2A2P11168 524 aaPredicted RBP7.86□□□□□ -1.15
GGA3-202ENST00000538886 GABRA1P14867 456 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 SSTP61278 116 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 PSPHP78330 225 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 CEBPEQ15744 281 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 ZNF141Q15928 474 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 SSX2Q16385 188 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 PTCHD4Q6ZW05 846 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 SSX9Q7RTT3 188 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 TMEM200AQ86VY9 491 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 NAXEQ8NCW5 288 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 SDR9C7Q8NEX9 313 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 SLC25A43Q8WUT9 341 aaPredicted RBP7.86□□□□□ -1.15
GGA3-202ENST00000538886 HGDQ93099 445 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 HS6ST2Q96MM7 605 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 NDUFAF4Q9P032 175 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 COMMD3Q9UBI1 195 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 TBC1D24Q9ULP9 559 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 ICAM5Q9UMF0 924 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 ADAM18Q9Y3Q7 739 aa7.86□□□□□ -1.15
GGA3-202ENST00000538886 USP9YO00507 2555 aaPredicted RBP7.86□□□□□ -1.15
GGA3-202ENST00000538886 NKX2-6A6NCS4 301 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 KDM4EB2RXH2 506 aaPredicted RBP7.85□□□□□ -1.15
GGA3-202ENST00000538886 J3QKU1 62 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 ST8SIA5O15466 376 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 EIF1BO60739 113 aaKnown RBP7.85□□□□□ -1.15
GGA3-202ENST00000538886 ACSM4P0C7M7 580 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 PLPPR5Q32ZL2 321 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 RNASE12Q5GAN4 147 aaKnown RBP7.85□□□□□ -1.15
GGA3-202ENST00000538886 LAX1Q8IWV1 398 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 CDH26Q8IXH8 852 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 ZNF565Q8N9K5 539 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 SETD6Q8TBK2 473 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 ACOT11Q8WXI4 607 aaPredicted RBP7.85□□□□□ -1.15
GGA3-202ENST00000538886 MYDGFQ969H8 173 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 TAAR8Q969N4 342 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 GPR137Q96N19 417 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 MNTQ99583 582 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 EGLN3Q9H6Z9 239 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 ACER3Q9NUN7 267 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 ASB6Q9NWX5 421 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 LRP4O75096 1905 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 TP53BP1Q12888 1972 aaPredicted RBP7.85□□□□□ -1.15
GGA3-202ENST00000538886 TNRC6AQ8NDV7 1962 aaKnown RBP7.85□□□□□ -1.15
GGA3-202ENST00000538886 A0A087WUU8 490 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 TERTO14746 1132 aaKnown RBP7.85□□□□□ -1.15
GGA3-202ENST00000538886 TLX2O43763 284 aaPredicted RBP7.85□□□□□ -1.15
GGA3-202ENST00000538886 LY86O95711 162 aa7.85□□□□□ -1.15
GGA3-202ENST00000538886 DNASE1P24855 282 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms