RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 BLOC1S5-TXNDC5H3BN57 136 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 SFTA3P0C7M3 94 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 MPZP25189 248 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 HTR2CP28335 458 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 FAM53BQ14153 422 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 RNF212Q495C1 297 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 RNASE10Q5GAN6 216 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 TMPRSS9Q7Z410 1059 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 SAT2Q96F10 170 aaPredicted RBP16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 MBNL1Q9NR56 388 aaKnown RBP16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 DTX4Q9Y2E6 619 aa16.78■□□□□ 0.28
SFSWAP-207ENST00000538548 CACNA1CQ13936 2221 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 GPR75O95800 540 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 PMPCAQ10713 525 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 TCEAL5Q5H9L2 206 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 ASPHD2Q6ICH7 369 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 CD163Q86VB7 1156 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 OR4S1Q8NGB4 309 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 HOXB13Q92826 284 aaPredicted RBP16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 C14orf79Q96F83 325 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 CDC6Q99741 560 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 GAL3ST1Q99999 423 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 HRH4Q9H3N8 390 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 METTL1Q9UBP6 276 aaKnown RBP16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 TMED7Q9Y3B3 224 aa16.77■□□□□ 0.28
SFSWAP-207ENST00000538548 ZNF860A6NHJ4 632 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 IGHV2-70P01814 119 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 GUSBP08236 651 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 IFI6P09912 130 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 ZNF10P21506 573 aaPredicted RBP16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 ARRB1P49407 418 aaPredicted RBP16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 PPT1P50897 306 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 FDX2Q6P4F2 183 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 KCTD9Q7L273 389 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 RCBTB1Q8NDN9 531 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 CASTOR1Q8WTX7 329 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 CTHRC1Q96CG8 243 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 TM4SF19Q96DZ7 209 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 ZNF587Q96SQ5 575 aaPredicted RBP16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 NKX3-1Q99801 234 aaPredicted RBP16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 SLC17A9Q9BYT1 436 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 NMES1Q9C002 83 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 ZBP1Q9H171 429 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 HIF3AQ9Y2N7 669 aa16.77■□□□□ 0.27
SFSWAP-207ENST00000538548 C5orf51A6NDU8 294 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 URADA6NGE7 173 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 EFCAB7A8K855 629 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 PHYHO14832 338 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 DUS4LO95620 317 aaKnown RBP16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 GRK6P43250 576 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 RBM39Q14498 530 aaKnown RBP16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 ITPRIPL2Q3MIP1 535 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 ADGRE4PQ86SQ3 457 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 ZNF561Q8N587 486 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 FAM174AQ8TBP5 190 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 MRGPRFQ96AM1 343 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 SMIM8Q96KF7 97 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 ZMAT3Q9HA38 289 aaKnown RBP16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 LYRM4Q9HD34 91 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 PCDHGA1Q9Y5H4 931 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 DNAH14Q0VDD8 3507 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 A0A1W2PPC1 479 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 DBX1A6NMT0 343 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 RNASEK-C17orf49H0YIS7 233 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 TO15178 435 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 CXCL14O95715 111 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 FGF19O95750 216 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 TIMP1P01033 207 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 IGKV1D-16P01601 117 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 EN2P19622 333 aaPredicted RBP16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 VAMP1P23763 118 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 RPS27P42677 84 aaKnown RBP16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 PSG6Q00889 435 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 CDNFQ49AH0 187 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 GLYATL3Q5SZD4 288 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 AWAT2Q6E213 333 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 TMEM225Q6GV28 225 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 FBXO42Q6P3S6 717 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 OR4E2Q8NGC2 313 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 SLC39A7Q92504 469 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 HIST1H2BAQ96A08 127 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 RRNAD1Q96FB5 475 aaKnown RBP16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 RNF126Q9BV68 326 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 WIF1Q9Y5W5 379 aa16.76■□□□□ 0.27
SFSWAP-207ENST00000538548 LOC100509620A0A075B734 347 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 AGAP20933 346 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 MAOAP21397 527 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 SLC6A9P48067 706 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 CX3CR1P49238 355 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 CTXN1P60606 82 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 CYCSP99999 105 aaKnown RBP16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 ALG10Q5BKT4 473 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 PHF19Q5T6S3 580 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 CORO6Q6QEF8 472 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 LRRC75AQ8NAA5 344 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 ZSCAN4Q8NAM6 433 aaPredicted RBP16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 TMEM52Q8NDY8 209 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 OR52R1Q8NGF1 315 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 ADAMTS17Q8TE56 1095 aa16.75■□□□□ 0.27
SFSWAP-207ENST00000538548 C3orf49Q96BT1 292 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms