RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 ELOVL3Q9HB03 270 aa7.36□□□□□ -1.23
DDB1-212ENST00000538470 ZDHHC8Q9ULC8 765 aa7.36□□□□□ -1.23
DDB1-212ENST00000538470 NDRG4Q9ULP0 352 aaKnown RBP7.36□□□□□ -1.23
DDB1-212ENST00000538470 A4GNTQ9UNA3 340 aa7.36□□□□□ -1.23
DDB1-212ENST00000538470 WIPI2Q9Y4P8 454 aa7.36□□□□□ -1.23
DDB1-212ENST00000538470 TIMM10BQ9Y5J6 103 aa7.36□□□□□ -1.23
DDB1-212ENST00000538470 LOC100509620A0A075B734 347 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 IGKV1D-43A0A0B4J1Z2 117 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 C12orf71A8MTZ7 269 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 AHCYL1O43865 530 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 SNX3O60493 162 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 VENTXO95231 258 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 MPZL1O95297 269 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 IGHV1-46P01743 117 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 IFNW1P05000 195 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 COX5BP10606 129 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 GSTM3P21266 225 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 EPHA1P21709 976 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 CCNOP22674 350 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 TUBG1P23258 451 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 LIMS1P48059 325 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 HILS1P60008 231 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 CTXN1P60606 82 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 PPP1CBP62140 327 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 ERVK-25P63136 954 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 PSG4Q00888 419 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 MVKQ03426 396 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 SCRN3Q0VDG4 424 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 TRAM2Q15035 370 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 SGCAQ16586 387 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 AVPI1Q5T686 147 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 C12orf54Q6X4T0 127 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 ZER1Q7Z7L7 766 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 RNF113BQ8IZP6 322 aaKnown RBP7.35□□□□□ -1.23
DDB1-212ENST00000538470 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.35□□□□□ -1.23
DDB1-212ENST00000538470 LRRC75AQ8NAA5 344 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 SLC25A40Q8TBP6 338 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 KLF14Q8TD94 323 aaPredicted RBP7.35□□□□□ -1.23
DDB1-212ENST00000538470 NSMAFQ92636 917 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 RCN3Q96D15 328 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 ZMYND19Q96E35 227 aaPredicted RBP7.35□□□□□ -1.23
DDB1-212ENST00000538470 TPD52L3Q96J77 140 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 COG8Q96MW5 612 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 GAL3ST1Q99999 423 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 RBM4Q9BWF3 364 aaKnown RBP7.35□□□□□ -1.23
DDB1-212ENST00000538470 SUCNR1Q9BXA5 334 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 WNT5BQ9H1J7 359 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 ANKRD19PQ9H560 264 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 TUBG2Q9NRH3 451 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 ATPIF1Q9UII2 106 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 TENM1Q9UKZ4 2725 aa7.35□□□□□ -1.23
DDB1-212ENST00000538470 PPIAL4EA0A075B759 164 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 TRAV27A0A087WT01 109 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 PPIAL4CA0A0B4J2A2 164 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 A0A1W2PPL8 197 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 ZSCAN5BA6NJL1 495 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 EFCAB9A8MZ26 197 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 PPIAL4DF5H284 164 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 J3QW42 95 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 SPRY3O43610 288 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 PLPP2O43688 288 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 UBOX5O94941 541 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 ABHD16AO95870 558 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 PPIAL4FP0DN26 164 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 COX4I1P13073 169 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 MAKP20794 623 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 TNFSF4P23510 183 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 LAP3P28838 519 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 MPV17P39210 176 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 COMPP49747 757 aaPredicted RBP7.34□□□□□ -1.23
DDB1-212ENST00000538470 ACTG1P63261 375 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 PRKCDQ05655 676 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 ENDOGQ14249 297 aaKnown RBP7.34□□□□□ -1.23
DDB1-212ENST00000538470 LAPTM4AQ15012 233 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 TSTQ16762 297 aaKnown RBP7.34□□□□□ -1.23
DDB1-212ENST00000538470 IFI44LQ53G44 452 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 MTX3Q5HYI7 312 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 SPATA46Q5T0L3 261 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 DCAF12L2Q5VW00 463 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 FAHD2BQ6P2I3 314 aaPredicted RBP7.34□□□□□ -1.23
DDB1-212ENST00000538470 PEG10Q86TG7 708 aaKnown RBP7.34□□□□□ -1.23
DDB1-212ENST00000538470 OAFQ86UD1 273 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 TREML1Q86YW5 311 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 NRMQ8IXM6 262 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 OR13C2Q8NGS9 318 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 AKR7LQ8NHP1 331 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 ABHD4Q8TB40 342 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 ACOT11Q8WXI4 607 aaPredicted RBP7.34□□□□□ -1.23
DDB1-212ENST00000538470 GTF3AQ92664 365 aaKnown RBP7.34□□□□□ -1.23
DDB1-212ENST00000538470 FAHD2AQ96GK7 314 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 FNDC11Q9BVV2 318 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 TMPRSS13Q9BYE2 586 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 OR2J1Q9GZK6 312 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 POLE4Q9NR33 117 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 MAN2C1Q9NTJ4 1040 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 TBCCD1Q9NVR7 557 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 PCDHB10Q9UN67 800 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 TMEM5Q9Y2B1 443 aa7.34□□□□□ -1.23
DDB1-212ENST00000538470 ARHGAP32A7KAX9 2087 aa7.33□□□□□ -1.24
DDB1-212ENST00000538470 LOC105371242A0A075B767 164 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms