RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 AGBL2Q5U5Z8 902 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 C16orf87Q6PH81 154 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 BLOC1S3Q6QNY0 202 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 HDDC2Q7Z4H3 204 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 LRRC28Q86X40 367 aaPredicted RBP11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 FUNDC1Q8IVP5 155 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 KIR3DL3Q8N743 410 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 ZNF283Q8N7M2 679 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 OR4D11Q8NGI4 311 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 SPDL1Q96EA4 605 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 CCT8L2Q96SF2 557 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 SEPHS2Q99611 448 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 WNT5BQ9H1J7 359 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 TMBIM4Q9HC24 238 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 KLHL21Q9UJP4 597 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 CORO2BQ9UQ03 480 aa11.77□□□□□ -0.53
SMARCA4-206ENST00000538456 TRBV5-3A0A0A0MS03 114 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 F5H0A9 414 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 TNFSF4P23510 183 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 AQP2P41181 271 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 ARHGDIAP52565 204 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 UGT2B15P54855 530 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 PCBP3P57721 371 aaKnown RBP11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 PAX8Q06710 450 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 PSG7Q13046 419 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 CDK5R2Q13319 367 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 CYP51A1Q16850 503 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 ZNF774Q6NX45 483 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 BRICD5Q6PL45 260 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 PFN4Q8NHR9 129 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 SIGLEC11Q96RL6 698 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 PKP2Q99959 881 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 CPPED1Q9BRF8 314 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 ZNF426Q9BUY5 554 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 OR2H1Q9GZK4 316 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 NANOGQ9H9S0 305 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 MEPEQ9NQ76 525 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 INIPQ9NRY2 104 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 PPP1R3CQ9UQK1 317 aa11.76□□□□□ -0.53
SMARCA4-206ENST00000538456 FAM181BA6NEQ2 426 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 CEACAM18A8MTB9 384 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 CENPBD1B2RD01 187 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 HMGB1P1B2RPK0 211 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 H3BSA7 217 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 M0QX08 132 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 TNFRSF1AP19438 455 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 CD247P20963 164 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 LAP3P28838 519 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 MDH2P40926 338 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 ZNF133P52736 654 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 RAG2P55895 527 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 TOP3AQ13472 1001 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 TTMPQ5BVD1 217 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 ARMC4Q5T2S8 1044 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 BTNL3Q6UXE8 466 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 BRD3OSQ6XYD6 125 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 Q6ZR03 302 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 C9orf139Q6ZV77 190 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 ZER1Q7Z7L7 766 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 PTOV1Q86YD1 416 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 ALDH16A1Q8IZ83 802 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 CLDN22Q8N7P3 220 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 C11orf65Q8NCR3 313 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 MOSPD2Q8NHP6 518 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 ITLN1Q8WWA0 313 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 HDAC2Q92769 488 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 ZDHHC16Q969W1 377 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 MPP4Q96JB8 637 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 ATP6V1G3Q96LB4 118 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 C4orf45Q96LM5 186 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 SAMD8Q96LT4 415 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 PRSS27Q9BQR3 290 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 POFUT1Q9H488 388 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 SMURF2Q9HAU4 748 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 ELOVL3Q9HB03 270 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 LRCH1Q9Y2L9 728 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 MMP24Q9Y5R2 645 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 GMEB1Q9Y692 573 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 USH1CQ9Y6N9 552 aa11.75□□□□□ -0.53
SMARCA4-206ENST00000538456 POLR3GO15318 223 aaPredicted RBP11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 OR7A10O76100 309 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 ZNF205O95201 554 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 ABHD16AO95870 558 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 PLATP00750 562 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 CRYBA1P05813 215 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 RPS2P15880 293 aaKnown RBP11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 FUT1P19526 365 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 GSTM3P21266 225 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 OCLNQ16625 522 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 DEFB112Q30KQ8 113 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 FAM27BQ5VT28 67 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 EPGNQ6UW88 154 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 C1orf174Q8IYL3 243 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 OR4F5Q8NH21 305 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 UPRTQ96BW1 309 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 NMD3Q96D46 503 aaKnown RBP11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 MARCH7Q9H992 704 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 BEX1Q9HBH7 125 aa11.74□□□□□ -0.53
SMARCA4-206ENST00000538456 IL20RAQ9UHF4 553 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms