RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 FFAR1O14842 300 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 IGHMP01871 453 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 ADH4P08319 380 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 COMPP49747 757 aaPredicted RBP7.16□□□□□ -1.26
USP28-203ENST00000537490 LCN6P62502 163 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 ACTG1P63261 375 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 SCGB2A2Q13296 93 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 DCAF12L2Q5VW00 463 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 CGB2Q6NT52 195 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 USP43Q70EL4 1123 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 NRMQ8IXM6 262 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 ALDH16A1Q8IZ83 802 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 OR2T12Q8NG77 320 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 OR4M2Q8NGB6 313 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 FAM216AQ8WUB2 273 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 GEMIN6Q8WXD5 167 aaKnown RBP7.16□□□□□ -1.26
USP28-203ENST00000537490 TIMD4Q96H15 378 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 C4orf45Q96LM5 186 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 GAL3ST1Q99999 423 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 POFUT1Q9H488 388 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 C7orf69Q9H7B7 122 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 MAN2C1Q9NTJ4 1040 aa7.16□□□□□ -1.26
USP28-203ENST00000537490 A0A087WUU8 490 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 PLSCR5A0PG75 271 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 ELOVL7A1L3X0 281 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 ISPDA4D126 451 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 HTR3EA5X5Y0 456 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 GMNCA6NCL1 334 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 BBIP1A8MTZ0 92 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 EFCAB9A8MZ26 197 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 TRIM77I1YAP6 450 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 J3QLI3 93 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 ICMTO60725 284 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 SASH3O75995 380 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 FSHBP01225 129 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 CD55P08174 381 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 SBK2P0C263 348 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 NR2C1P13056 603 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 ZNF26P17031 533 aaPredicted RBP7.15□□□□□ -1.26
USP28-203ENST00000537490 MSR1P21757 451 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 ZFP36P26651 326 aaKnown RBP7.15□□□□□ -1.26
USP28-203ENST00000537490 LIPAP38571 399 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 GUCA1AP43080 201 aaPredicted RBP7.15□□□□□ -1.26
USP28-203ENST00000537490 PCBD1P61457 104 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 LCN2P80188 198 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 TNFAIP6P98066 277 aaPredicted RBP7.15□□□□□ -1.26
USP28-203ENST00000537490 PRKCDQ05655 676 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 PSG7Q13046 419 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 CDK5R2Q13319 367 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 MAPRE2Q15555 327 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 MTX3Q5HYI7 312 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 OTPQ5XKR4 325 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 TBPL2Q6SJ96 375 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 UNQ6126/PRO20091Q6UXV3 157 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 VTCN1Q7Z7D3 282 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 C1orf174Q8IYL3 243 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 OFCC1Q8IZS5 231 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 TEX29Q8N6K0 151 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 ZDHHC22Q8N966 263 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 PCYOX1LQ8NBM8 494 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 OR13C2Q8NGS9 318 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 NANPQ8TBE9 248 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 FNDC8Q8TC99 324 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 C22orf15Q8WYQ4 148 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 GCDHQ92947 438 aaPredicted RBP7.15□□□□□ -1.26
USP28-203ENST00000537490 DCLRE1CQ96SD1 692 aaKnown RBP7.15□□□□□ -1.26
USP28-203ENST00000537490 SLC6A7Q99884 636 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 EGLN1Q9GZT9 426 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 VIPAS39Q9H9C1 493 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 ELOVL3Q9HB03 270 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 EMC7Q9NPA0 242 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 ESM1Q9NQ30 184 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 POLE4Q9NR33 117 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 CYSLTR2Q9NS75 346 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 FGFR1OP2Q9NVK5 253 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 GID8Q9NWU2 228 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 CMTM6Q9NX76 183 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 UBAP1Q9NZ09 502 aa7.15□□□□□ -1.26
USP28-203ENST00000537490 A6NIZ1 184 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 ARHGAP32A7KAX9 2087 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 C12orf71A8MTZ7 269 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 H3BSA7 217 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 CDC42EP2O14613 210 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 TIMM8AO60220 97 aaPredicted RBP7.14□□□□□ -1.27
USP28-203ENST00000537490 PRSS23O95084 383 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 IGHV2-70P01814 119 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 TROVE2P10155 538 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP28-203ENST00000537490 H2AFXP16104 143 aaPredicted RBP7.14□□□□□ -1.27
USP28-203ENST00000537490 EGR1P18146 543 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 IFNA8P32881 189 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 ARHGDIAP52565 204 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 RAP1BP61224 184 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 RAP1AP62834 184 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 SLC3A1Q07837 685 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 TRAM2Q15035 370 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 ANKDD1AQ495B1 522 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 FAM205BPQ63HN1 556 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 Q6ZR03 302 aa7.14□□□□□ -1.27
USP28-203ENST00000537490 TSEN54Q7Z6J9 526 aaKnown RBP7.14□□□□□ -1.27
USP28-203ENST00000537490 SYT9Q86SS6 491 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms