RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 OR52N5Q8NH56 324 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 DUSP19Q8WTR2 217 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 SLC25A44Q96H78 314 aaPredicted RBP12.86□□□□□ -0.35
USP44-203ENST00000537435 FXYD6Q9H0Q3 95 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 ZNF304Q9HCX3 659 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 SPEF1Q9Y4P9 236 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 CEP290O15078 2479 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 ARPC4-TTLL3A0A0A6YYG9 625 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 A0A1W2PPC1 479 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 HMSDA8MTL9 139 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 IGHMP01871 453 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 IGFBP3P17936 291 aaPredicted RBP12.86□□□□□ -0.35
USP44-203ENST00000537435 IL11P20809 199 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 OR1D5P58170 312 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 ACTBP60709 375 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 ACTG1P63261 375 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 GLO1Q04760 184 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 SSBP1Q04837 148 aaKnown RBP12.86□□□□□ -0.35
USP44-203ENST00000537435 C4orf46Q504U0 113 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 WDR45BQ5MNZ6 344 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 TMUB2Q71RG4 321 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 ZNF627Q7L945 461 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 WBP1Q96G27 269 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
USP44-203ENST00000537435 MKL2Q9ULH7 1088 aa12.86□□□□□ -0.35
USP44-203ENST00000537435 MRPS18BQ9Y676 258 aaKnown RBP12.86□□□□□ -0.35
USP44-203ENST00000537435 hCG_1807616A0A1W2PRN6 198 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 SOX1O00570 391 aaPredicted RBP12.85□□□□□ -0.35
USP44-203ENST00000537435 FADS1O60427 444 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 ZNF217O75362 1048 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 RP2O75695 350 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 ACSM4P0C7M7 580 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 CRABP1P29762 137 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 TOMM20Q15388 145 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 TSSK4Q6SA08 328 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 TMEM205Q6UW68 189 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.85□□□□□ -0.35
USP44-203ENST00000537435 OR51A2Q8NGJ7 313 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 SEH1LQ96EE3 360 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 C1QTNF6Q9BXI9 259 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 VN1R1Q9GZP7 353 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 ARL6Q9H0F7 186 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 COQ3Q9NZJ6 369 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 EMC9Q9Y3B6 208 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 LOC105371267A0A1B0GV96 52 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 DCDC2BA2VCK2 349 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 METTL12A8MUP2 240 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 LMO7DNF2Z398 122 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 FSTP19883 344 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 SLC26A5P58743 744 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 TAS2R19P59542 299 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 C11orf88Q6PI97 169 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 OGFOD3Q6PK18 319 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 ALKAL2Q6UX46 152 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 ZNF441Q8N8Z8 693 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 ZNF454Q8N9F8 522 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 SLC41A2Q96JW4 573 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 MYEF2Q9P2K5 600 aaKnown RBP12.85□□□□□ -0.35
USP44-203ENST00000537435 R4GMQ9 66 aa12.85□□□□□ -0.35
USP44-203ENST00000537435 SULT1C2O00338 296 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 RAB3DO95716 219 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 ITGB2P05107 769 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 LPLP06858 475 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 FOLR1P15328 257 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 DNASE1L1P49184 302 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 FOXL2P58012 376 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 CFHR1Q03591 330 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 SPOCK1Q08629 439 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 SQSTM1Q13501 440 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 LRFN4Q6PJG9 635 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 LANCL3Q6ZV70 420 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 GPAT4Q86UL3 456 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 OR6M1Q8NGM8 313 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 OR13C3Q8NGS6 347 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 STK35Q8TDR2 534 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 CMKLR1Q99788 373 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 DPYSL5Q9BPU6 564 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 POFUT1Q9H488 388 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 HHLA2Q9UM44 414 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 PCNX3Q9H6A9 2034 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 VCANP13611 3396 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 M0QYG6 137 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 OR2T1O43869 369 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 SRSF10O75494 262 aaKnown RBP12.84□□□□□ -0.35
USP44-203ENST00000537435 PPP3CBP16298 524 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
USP44-203ENST00000537435 HNRNPKP61978 463 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP44-203ENST00000537435 FMODQ06828 376 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 SMUG1Q53HV7 270 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 GLRX5Q86SX6 157 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 GALNT16Q8N428 558 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 TMEM229BQ8NBD8 167 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 ZNF248Q8NDW4 579 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 COQ8AQ8NI60 647 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 CXorf58Q96LI9 332 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 NPAS1Q99742 590 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 POTEKPQ9BYX7 375 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 ZMAT3Q9HA38 289 aaKnown RBP12.84□□□□□ -0.35
USP44-203ENST00000537435 RP1P56715 2156 aa12.84□□□□□ -0.35
USP44-203ENST00000537435 IGHV1OR21-1A0A087WYE8 117 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms