RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 FAM157BP0CG42 384 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 COX5BP10606 129 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 CDKN2AP42771 156 aaKnown RBP14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 NR4A2P43354 598 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 LSM6P62312 80 aaKnown RBP14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 TMEM249Q2WGJ8 235 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 ZNF770Q6IQ21 691 aaPredicted RBP14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 PGBD2Q6P3X8 592 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 TRPM8Q7Z2W7 1104 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 ZNF786Q8N393 782 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 ZNF540Q8NDQ6 660 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 AKR7LQ8NHP1 331 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 FANK1Q8TC84 345 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 BCAS4Q8TDM0 211 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 FOXN4Q96NZ1 517 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 SYT3Q9BQG1 590 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 PIMREGQ9BSJ6 248 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 REV1Q9UBZ9 1251 aa14.75□□□□□ -0.05
SFSWAP-205ENST00000537164 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.74□□□□□ -0.053e-7■■■□□ 19.1
SFSWAP-205ENST00000537164 INAFM1C9JVW0 142 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 SOCS2O14508 198 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 ACOT8O14734 319 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 IDH3BO43837 385 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 KHDRBS3O75525 346 aaKnown RBP14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 STAMBPO95630 424 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 TP53P04637 393 aaPredicted RBP14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 DAOP14920 347 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 USF1P22415 310 aaPredicted RBP14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 SLC6A6P31641 620 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 WNT5AP41221 380 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 KLF3P57682 345 aaPredicted RBP14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 KCNMB1Q16558 191 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 UGT2A3Q6UWM9 527 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 UNQ6126/PRO20091Q6UXV3 157 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 ZNF620Q6ZNG0 422 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 GLB1L2Q8IW92 636 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 ZNF101Q8IZC7 436 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 OR4C15Q8NGM1 316 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 SYNPRQ8TBG9 265 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 GNPDA2Q8TDQ7 276 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 C11orf40Q8WZ69 217 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 BTBD10Q9BSF8 475 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 NUAK2Q9H093 628 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 DUSP13Q9UII6 198 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 MXRA5Q9NR99 2828 aa14.74□□□□□ -0.05
SFSWAP-205ENST00000537164 C5orf49A4QMS7 147 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 SLC16A7O60669 478 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 PPP1R3DO95685 299 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 IGHV3-13P01766 116 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 LCKP06239 509 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 CRABP1P29762 137 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 ALDH3B1P43353 468 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 GDI2P50395 445 aaKnown RBP14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 SELENOVP59797 346 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 ERVS71-1P61550 626 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 PPP2R2BQ00005 443 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 SCRN3Q0VDG4 424 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 TRAP1Q12931 704 aaKnown RBP14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 RIN1Q13671 783 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 UBASH3BQ8TF42 649 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 ERMAPQ96PL5 475 aaPredicted RBP14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 EMC7Q9NPA0 242 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 SLCO1C1Q9NYB5 712 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 IL20Q9NYY1 176 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 NDRG4Q9ULP0 352 aaKnown RBP14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 FZR1Q9UM11 496 aa14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 COA3Q9Y2R0 106 aaPredicted RBP14.73□□□□□ -0.05
SFSWAP-205ENST00000537164 SVEP1Q4LDE5 3571 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 ABCA2Q9BZC7 2435 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 IGLV1-36A0A0B4J1U3 117 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 H3BSA7 217 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 TNFRSF11BO00300 401 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 DCTN6O00399 190 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 CLPTM1O96005 669 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 MRPS11P82912 194 aaKnown RBP14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 AQP6Q13520 282 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 GK3PQ14409 553 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 MAD2L1BPQ15013 274 aaPredicted RBP14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 FAM98BQ52LJ0 330 aaKnown RBP14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 RPL13AP3Q6NVV1 102 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 ZNF774Q6NX45 483 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 PGM2L1Q6PCE3 622 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 ZBTB46Q86UZ6 589 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 OR1J1Q8NGS3 322 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 MARS2Q96GW9 593 aaKnown RBP14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 CLPTM1LQ96KA5 538 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 SAMD8Q96LT4 415 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 TPK1Q9H3S4 243 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 NKIRAS2Q9NYR9 191 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 EIF3KQ9UBQ5 218 aaKnown RBP14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 ATPIF1Q9UII2 106 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 GPR160Q9UJ42 338 aa14.72□□□□□ -0.05
SFSWAP-205ENST00000537164 MALRD1Q5VYJ5 2156 aa14.71□□□□□ -0.05
SFSWAP-205ENST00000537164 CRLF1O75462 422 aa14.71□□□□□ -0.05
SFSWAP-205ENST00000537164 TACSTD2P09758 323 aa14.71□□□□□ -0.05
SFSWAP-205ENST00000537164 RAP2AP10114 183 aa14.71□□□□□ -0.05
SFSWAP-205ENST00000537164 GAAP10253 952 aa14.71□□□□□ -0.05
SFSWAP-205ENST00000537164 HIST1H1CP16403 213 aaKnown RBP14.71□□□□□ -0.05
SFSWAP-205ENST00000537164 CCNOP22674 350 aa14.71□□□□□ -0.05
SFSWAP-205ENST00000537164 TUBG1P23258 451 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms