RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CCDC134Q9H6E4 229 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 METTL17Q9H7H0 456 aaPredicted RBP11.19□□□□□ -0.62
RTN3-207ENST00000536011 ZNF665Q9H7R5 613 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 GRHPRQ9UBQ7 328 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 ZDHHC8Q9ULC8 765 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 NDRG4Q9ULP0 352 aaKnown RBP11.19□□□□□ -0.62
RTN3-207ENST00000536011 TMEM5Q9Y2B1 443 aa11.19□□□□□ -0.62
RTN3-207ENST00000536011 TRAV27A0A087WT01 109 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 A0A0G2JMP0 313 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 A0A0X1KG70 313 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 FAM157AC9JC47 383 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 CXCR6O00574 342 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 CCDC22O60826 627 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 GSTM3P21266 225 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 TUBG1P23258 451 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 RPL4P36578 427 aaKnown RBP11.18□□□□□ -0.62
RTN3-207ENST00000536011 WNT5AP41221 380 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 LMO4P61968 165 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 PPP1CBP62140 327 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 MVKQ03426 396 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 LIPEQ05469 1076 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 SCRN3Q0VDG4 424 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 SF3A3Q12874 501 aaKnown RBP eCLIP11.18□□□□□ -0.62
RTN3-207ENST00000536011 TSTQ16762 297 aaKnown RBP11.18□□□□□ -0.62
RTN3-207ENST00000536011 SPATA46Q5T0L3 261 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 CGB2Q6NT52 195 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 FOXL2NBQ6ZUU3 175 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 MBOAT2Q6ZWT7 520 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 FKBP9P1Q75LS8 142 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 VTCN1Q7Z7D3 282 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 ZNF101Q8IZC7 436 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 NPEPL1Q8NDH3 523 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 OR4M2Q8NGB6 313 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 ABHD4Q8TB40 342 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 ZNF418Q8TF45 676 aaPredicted RBP11.18□□□□□ -0.62
RTN3-207ENST00000536011 ZFAND2BQ8WV99 257 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 IPCEF1Q8WWN9 437 aaPredicted RBP11.18□□□□□ -0.62
RTN3-207ENST00000536011 MARS2Q96GW9 593 aaKnown RBP11.18□□□□□ -0.62
RTN3-207ENST00000536011 TUBG2Q9NRH3 451 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 ARMCX1Q9P291 453 aa11.18□□□□□ -0.62
RTN3-207ENST00000536011 LOC100509620A0A075B734 347 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 IGKV1D-43A0A0B4J1Z2 117 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 J3QLI3 93 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 COX5BP10606 129 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 ITGA2P17301 1181 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 MAKP20794 623 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 TNFSF4P23510 183 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 GATA3P23771 443 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 YAP1P46937 504 aaKnown RBP11.17□□□□□ -0.62
RTN3-207ENST00000536011 MMP15P51511 669 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 SRSF2Q01130 221 aaKnown RBP11.17□□□□□ -0.62
RTN3-207ENST00000536011 AVPI1Q5T686 147 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 FAHD2BQ6P2I3 314 aaPredicted RBP11.17□□□□□ -0.62
RTN3-207ENST00000536011 RFPL4BQ6ZWI9 263 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 CBLL1Q75N03 491 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 IGFN1Q86VF2 1251 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 POU5F2Q8N7G0 328 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 OR13C2Q8NGS9 318 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 SLC25A40Q8TBP6 338 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 KLF14Q8TD94 323 aaPredicted RBP11.17□□□□□ -0.62
RTN3-207ENST00000536011 FAHD2AQ96GK7 314 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 COG8Q96MW5 612 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 OR2J1Q9GZK6 312 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 WNT5BQ9H1J7 359 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 EFCAB1Q9HAE3 211 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 KRCC1Q9NPI7 259 aaPredicted RBP11.17□□□□□ -0.62
RTN3-207ENST00000536011 MAN2C1Q9NTJ4 1040 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 CMTM6Q9NX76 183 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 RHCGQ9UBD6 479 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 WIPI2Q9Y4P8 454 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 NBEAL1Q6ZS30 2694 aa11.17□□□□□ -0.62
RTN3-207ENST00000536011 WNT9BO14905 357 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 SPRY3O43610 288 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 TIMM8AO60220 97 aaPredicted RBP11.16□□□□□ -0.62
RTN3-207ENST00000536011 GMNNO75496 209 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 MPZL1O95297 269 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 ABHD16AO95870 558 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 SERPINA1P01009 418 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 IGHV1-46P01743 117 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 ADH4P08319 380 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 CD14P08571 375 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 COX4I1P13073 169 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 GPR4P46093 362 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 SLC7A2P52569 658 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 GUCY1A3Q02108 690 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 ZBED5Q49AG3 693 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 ZNF774Q6NX45 483 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 HACD2Q6Y1H2 254 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 TMPRSS11FQ6ZWK6 438 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 MEX3DQ86XN8 651 aaKnown RBP11.16□□□□□ -0.62
RTN3-207ENST00000536011 TREML1Q86YW5 311 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 SLC15A3Q8IY34 581 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 LRRC75AQ8NAA5 344 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 CCL17Q92583 94 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 FAM162AQ96A26 154 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 HSH2DQ96JZ2 352 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 C4orf45Q96LM5 186 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 ZNF570Q96NI8 536 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 JMJD8Q96S16 334 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 GAL3ST1Q99999 423 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms