RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 OBP2BQ9NPH6 170 aa11.35□□□□□ -0.59
CHFR-210ENST00000535527 CMC2Q9NRP2 79 aa11.35□□□□□ -0.59
CHFR-210ENST00000535527 KRT84Q9NSB2 600 aa11.35□□□□□ -0.59
CHFR-210ENST00000535527 KIF17Q9P2E2 1029 aa11.35□□□□□ -0.59
CHFR-210ENST00000535527 STX18Q9P2W9 335 aaKnown RBP11.35□□□□□ -0.59
CHFR-210ENST00000535527 MOKQ9UQ07 419 aa11.35□□□□□ -0.59
CHFR-210ENST00000535527 RNF115Q9Y4L5 304 aa11.35□□□□□ -0.59
CHFR-210ENST00000535527 LHFPL6Q9Y693 200 aa11.35□□□□□ -0.59
CHFR-210ENST00000535527 IGHV2OR16-5A0A0B4J2B6 119 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 TVP23AA6NH52 213 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 CASKO14936 926 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 IDH3BO43837 385 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 PRKYO43930 277 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 KHDRBS3O75525 346 aaKnown RBP11.34□□□□□ -0.59
CHFR-210ENST00000535527 OR8G3PP0DMU2 310 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 ANPEPP15144 967 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 SPI1P17947 270 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 SLC2A5P22732 501 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 IGFBP5P24593 272 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 PEX2P28328 305 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 CAPZA2P47755 286 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 ZNF84P51523 738 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 UBE2NP61088 152 aaKnown RBP11.34□□□□□ -0.59
CHFR-210ENST00000535527 EFNB1P98172 346 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 PSG4Q00888 419 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 PTGES3Q15185 160 aaKnown RBP11.34□□□□□ -0.59
CHFR-210ENST00000535527 GSG1Q2KHT4 349 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 FAM27BQ5VT28 67 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 SLX4IPQ5VYV7 408 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 LPCAT4Q643R3 524 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 C12orf73Q69YU5 71 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.34□□□□□ -0.59
CHFR-210ENST00000535527 JAZF1Q86VZ6 243 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 ZDHHC13Q8IUH4 622 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 OR10S1Q8NGN2 331 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 PTP4A1Q93096 173 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 RBP7Q96R05 134 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 CXorf56Q9H5V9 222 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 SIAEQ9HAT2 523 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 BATF3Q9NR55 127 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 USE1Q9NZ43 259 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 FKBP7Q9Y680 259 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 CSPG4Q6UVK1 2322 aa11.34□□□□□ -0.59
CHFR-210ENST00000535527 USF3Q68DE3 2245 aa11.33□□□□□ -0.59
CHFR-210ENST00000535527 LOC100509620A0A075B734 347 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 CCDC182A6NF36 153 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 AHCYL1O43865 530 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 INHBBP09529 407 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 HOXB1P14653 301 aaPredicted RBP11.33□□□□□ -0.6
CHFR-210ENST00000535527 MSR1P21757 451 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 GGT2P36268 569 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 RAB1AP62820 205 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 KCNMB1Q16558 191 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 NRN1LQ496H8 165 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 PABPC1L2AQ5JQF8 200 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 ZNF774Q6NX45 483 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 SLC27A4Q6P1M0 643 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 CORO6Q6QEF8 472 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 PAMR1Q6UXH9 720 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 CLEC9AQ6UXN8 241 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 CFAP77Q6ZQR2 320 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 SLC16A14Q7RTX9 510 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 LINC00346Q8IVM7 164 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 PIAS4Q8N2W9 510 aaPredicted RBP11.33□□□□□ -0.6
CHFR-210ENST00000535527 ZNF511Q8NB15 262 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 SLC7A6Q92536 515 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 AKAP1Q92667 903 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHFR-210ENST00000535527 UBE2FQ969M7 185 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 USB1Q9BQ65 265 aaKnown RBP11.33□□□□□ -0.6
CHFR-210ENST00000535527 OR2H1Q9GZK4 316 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 NDEL1Q9GZM8 345 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 WDR76Q9H967 626 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 UBTD1Q9HAC8 227 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 PNRC2Q9NPJ4 139 aaKnown RBP11.33□□□□□ -0.6
CHFR-210ENST00000535527 PLEKHA6Q9Y2H5 1048 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 COMMD3-BMI1R4GMX3 469 aa11.33□□□□□ -0.6
CHFR-210ENST00000535527 GPRIN2O60269 458 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 UBL3O95164 117 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 ATE1O95260 518 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 BAG2O95816 211 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 RENP00797 406 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 HEXAP06865 529 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 CD3EP07766 207 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 SOD3P08294 240 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 CST2P09228 141 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 DANCRP0C864 163 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 ZNF35P13682 527 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 CD53P19397 219 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 APEX1P27695 318 aaKnown RBP11.32□□□□□ -0.6
CHFR-210ENST00000535527 HOXC12P31275 282 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 WNT5AP41221 380 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 SLC25A1P53007 311 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 CDH11P55287 796 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 ERVS71-1P61550 626 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 HIST1H3AP68431 136 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 NKX6-1P78426 367 aaPredicted RBP11.32□□□□□ -0.6
CHFR-210ENST00000535527 SNCBQ16143 134 aa11.32□□□□□ -0.6
CHFR-210ENST00000535527 ZIK1Q3SY52 487 aaPredicted RBP11.32□□□□□ -0.6
CHFR-210ENST00000535527 ZNF672Q499Z4 452 aaPredicted RBP11.32□□□□□ -0.6
CHFR-210ENST00000535527 CCDC92Q53HC0 331 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms