RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 OR10H3O60404 316 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 IGHV4-31P0DP07 118 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 CTLA4P16410 223 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 ATP6V1B2P21281 511 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 CYB5R2Q6BCY4 276 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 UGT2A3Q6UWM9 527 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 ADCK1Q86TW2 530 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 OR1J1Q8NGS3 322 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 WACQ9BTA9 647 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 SYT4Q9H2B2 425 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 EMC7Q9NPA0 242 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 TAAR3PQ9P1P4 343 aa25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 EIF3KQ9UBQ5 218 aaKnown RBP25.96■■□□□ 1.75
SSSCA1-207ENST00000533115 IGHV4-61A0A0C4DH41 118 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 SLC16A7O60669 478 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 TXNDC12O95881 172 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 NAT2P11245 290 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 FPR3P25089 353 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 IFNGR2P38484 337 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 WNT5AP41221 380 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 NKPD1Q17RQ9 610 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 MTX3Q5HYI7 312 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 ZNF774Q6NX45 483 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 RINLQ6ZS11 566 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 FANK1Q8TC84 345 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 SLCO1C1Q9NYB5 712 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 GPR160Q9UJ42 338 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 ABCA2Q9BZC7 2435 aa25.95■■□□□ 1.74
SSSCA1-207ENST00000533115 KHDRBS3O75525 346 aaKnown RBP25.94■■□□□ 1.74
SSSCA1-207ENST00000533115 T-ENOLP0DO92 83 aa25.94■■□□□ 1.74
SSSCA1-207ENST00000533115 APEHP13798 732 aaKnown RBP25.94■■□□□ 1.74
SSSCA1-207ENST00000533115 RFX4Q33E94 735 aa25.94■■□□□ 1.74
SSSCA1-207ENST00000533115 ALKBH6Q3KRA9 238 aa25.94■■□□□ 1.74
SSSCA1-207ENST00000533115 PTCHD4Q6ZW05 846 aa25.94■■□□□ 1.74
SSSCA1-207ENST00000533115 PRIMA1Q86XR5 153 aa25.94■■□□□ 1.74
SSSCA1-207ENST00000533115 ZNF101Q8IZC7 436 aa25.94■■□□□ 1.74
SSSCA1-207ENST00000533115 MUC13Q9H3R2 512 aa25.94■■□□□ 1.74
SSSCA1-207ENST00000533115 LYNX1G3V0Z9 82 aa25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 IMPA2O14732 288 aa25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 PPP1R3DO95685 299 aa25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 LYNX1P0DP58 116 aa25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 ZNF23P17027 643 aa25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 CDKN2AP42771 156 aaKnown RBP25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 GZMKP49863 264 aa25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 ELFN2Q5R3F8 820 aa25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 UNQ6126/PRO20091Q6UXV3 157 aa25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 ERMAPQ96PL5 475 aaPredicted RBP25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 OR52D1Q9H346 318 aa25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 RERGLQ9H628 205 aa25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 COA3Q9Y2R0 106 aaPredicted RBP25.93■■□□□ 1.74
SSSCA1-207ENST00000533115 KRT36O76013 467 aa25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 HPXP02790 462 aa25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 SLC6A6P31641 620 aa25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 GSSP48637 474 aa25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 RIN1Q13671 783 aa25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 C1orf94Q6P1W5 598 aa25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 GLB1L2Q8IW92 636 aa25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 GNPDA2Q8TDQ7 276 aa25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 SNX33Q8WV41 574 aa25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 NUAK2Q9H093 628 aa25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 HINT3Q9NQE9 182 aaKnown RBP25.92■■□□□ 1.74
SSSCA1-207ENST00000533115 TCRBV5S2A0A599 114 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 ZNF16P17020 682 aaPredicted RBP25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 MAGEA2P43356 314 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 HMGA2P52926 109 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 SCRN3Q0VDG4 424 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 TRIM25Q14258 630 aaKnown RBP25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 MOGQ16653 247 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 LCN8Q6JVE9 175 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 DHFR2Q86XF0 187 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 HIPK1Q86Z02 1210 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 C1orf174Q8IYL3 243 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 FAM53CQ9NYF3 392 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 NDRG4Q9ULP0 352 aaKnown RBP25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 LYVE1Q9Y5Y7 322 aa25.91■■□□□ 1.74
SSSCA1-207ENST00000533115 C17orf100A8MU93 164 aa25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 ICMTO60725 284 aa25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 IGHV3-13P01766 116 aa25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 COX5BP10606 129 aa25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 TSPAN31Q12999 210 aa25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 ZNF718Q3SXZ3 478 aa25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 SPATA46Q5T0L3 261 aa25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 PGBD2Q6P3X8 592 aa25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 RDH5Q92781 318 aa25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 MARS2Q96GW9 593 aaKnown RBP25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 PRPF19Q9UMS4 504 aaKnown RBP25.9■■□□□ 1.74
SSSCA1-207ENST00000533115 TNFRSF11BO00300 401 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 ARPC3O15145 178 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 TACSTD2P09758 323 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 COL8A2P25067 703 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 GCH1P30793 250 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 LSM6P62312 80 aaKnown RBP25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 MS4A2Q01362 244 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 AQP6Q13520 282 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 TMEM154Q6P9G4 183 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 RFPL4BQ6ZWI9 263 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 ABHD4Q8TB40 342 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 SLC25A40Q8TBP6 338 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 C4orf45Q96LM5 186 aa25.89■■□□□ 1.74
SSSCA1-207ENST00000533115 SAMD8Q96LT4 415 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms