RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 GSKIPQ9P0R6 139 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 KCNG2Q9UJ96 466 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 TMEM272A0A1B0GTI8 110 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 POM121BA6NF01 834 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 CCSO14618 274 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 CBX5P45973 191 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.52□□□□□ -1.05
BDNF-216ENST00000532997 EEF1A1P5Q5VTE0 462 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 UNQ6126/PRO20091Q6UXV3 157 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 SLC36A1Q7Z2H8 476 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 BAP18Q8IXM2 172 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 RNF128Q8TEB7 428 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 LRRC3BQ96PB8 259 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 ADOQ96SZ5 270 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 LPAR4Q99677 370 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 NMNAT2Q9BZQ4 307 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 TINAGL1Q9GZM7 467 aaPredicted RBP8.52□□□□□ -1.05
BDNF-216ENST00000532997 LAT2Q9GZY6 243 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 MYEF2Q9P2K5 600 aaKnown RBP8.52□□□□□ -1.05
BDNF-216ENST00000532997 CGGBP1Q9UFW8 167 aaPredicted RBP8.52□□□□□ -1.05
BDNF-216ENST00000532997 GMEB2Q9UKD1 530 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 WIF1Q9Y5W5 379 aa8.52□□□□□ -1.05
BDNF-216ENST00000532997 BORCS7-ASMTA0A0B4J1R7 106 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 TLX3O43711 291 aaPredicted RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 EIF4E2O60573 245 aaKnown RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 IGF2P01344 180 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 CHRM2P08172 466 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 FZD5Q13467 585 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 COL9A2Q14055 689 aaPredicted RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 HMGN3Q15651 99 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 TMEM255AQ5JRV8 349 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 C1orf53Q5VUE5 145 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 GALNTL5Q7Z4T8 443 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 LRRTM1Q86UE6 522 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 ZNF707Q96C28 371 aaPredicted RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 TIMP4Q99727 224 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 NPAS1Q99742 590 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 MICU1Q9BPX6 476 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 CCDC86Q9H6F5 360 aaKnown RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 PDE7BQ9NP56 450 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 OR52A1Q9UKL2 312 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 MRPS2Q9Y399 296 aaKnown RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 TRAV8-7A0A075B6U6 113 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 TRBV5-7A0A0A0MS05 114 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 NR2C1P13056 603 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 NR0B1P51843 470 aaKnown RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 POLR2HP52434 150 aaKnown RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 H2BFSP57053 126 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 PEA15Q15121 130 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 FAHD2BQ6P2I3 314 aaPredicted RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 Q6ZSR6 202 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 OR4K15Q8NH41 348 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 ANKRD9Q96BM1 317 aaPredicted RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 FAHD2AQ96GK7 314 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 VSTM2LQ96N03 204 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 SLC6A17Q9H1V8 727 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 EXOSC3Q9NQT5 275 aaKnown RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 PURGQ9UJV8 347 aaKnown RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 PCOLCE2Q9UKZ9 415 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 PCDHB10Q9UN67 800 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 EMC9Q9Y3B6 208 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 A0A0B4J2A0 478 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 PRSS37A4D1T9 235 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 TMEM235A6NFC5 223 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 MPTX1A8MV57 137 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 HCRTR1O43613 425 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 AKR7A3O95154 331 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 ITGB2P05107 769 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 TMIGD3P0DMS9 266 aaPredicted RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 ARRB1P49407 418 aaPredicted RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 EMP2P54851 167 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 S100A12P80511 92 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 MESP2Q0VG99 397 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 IL34Q6ZMJ4 242 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 PRSS41Q7RTY9 318 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 MDGA2Q7Z553 956 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 FJX1Q86VR8 437 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 METTL27Q8N6F8 245 aaPredicted RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 TCTN2Q96GX1 697 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 IFT22Q9H7X7 185 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 ZFP57Q9NU63 452 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 SHPKQ9UHJ6 478 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 B9D1Q9UPM9 204 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 SLC22A13Q9Y226 551 aa8.51□□□□□ -1.05
BDNF-216ENST00000532997 YBX2Q9Y2T7 364 aaKnown RBP8.51□□□□□ -1.05
BDNF-216ENST00000532997 LOC107986453A0A1B0GWG9 222 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 ZNF878C9JN71 531 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 UPK3AO75631 287 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 PRH1P02810 166 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 IFNA4P05014 189 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 NGFRP08138 427 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 RAB6AP20340 208 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 CASRP41180 1078 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 PPICP45877 212 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 DCAF12L2Q5VW00 463 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 LRRC69Q6ZNQ3 347 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 DTWD2Q8NBA8 298 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 CLEC1AQ8NC01 280 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 OR4C3Q8NH37 302 aa8.5□□□□□ -1.05
BDNF-216ENST00000532997 PHOSPHO2Q8TCD6 241 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms