RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 AKR7LQ8NHP1 331 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 SAMD8Q96LT4 415 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 ERMAPQ96PL5 475 aaPredicted RBP13.23□□□□□ -0.29
CPSF1-210ENST00000532935 OR2H1Q9GZK4 316 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 WNT5BQ9H1J7 359 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 VNN3Q9NY84 501 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 ABCA1O95477 2261 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 AQP12BA6NM10 295 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 C12orf71A8MTZ7 269 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 ARPC3O15145 178 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 KHDRBS3O75525 346 aaKnown RBP13.22□□□□□ -0.29
CPSF1-210ENST00000532935 CIB2O75838 187 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 CCNB2O95067 398 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 CSF3P09919 207 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 RAP2AP10114 183 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 PCSK6P29122 969 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 PPP1R8Q12972 351 aaKnown RBP13.22□□□□□ -0.29
CPSF1-210ENST00000532935 ZNF770Q6IQ21 691 aaPredicted RBP13.22□□□□□ -0.29
CPSF1-210ENST00000532935 UGT2A3Q6UWM9 527 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 SYT9Q86SS6 491 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 LRP11Q86VZ4 500 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 AQP12AQ8IXF9 295 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 ADGRG5Q8IZF4 528 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 FAM168AQ92567 244 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 POM121L2Q96KW2 1035 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 FOXN4Q96NZ1 517 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 SYT3Q9BQG1 590 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 IFT27Q9BW83 186 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 RAB1BQ9H0U4 201 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 OR51B6Q9H340 312 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 RERGLQ9H628 205 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 DYNLRB1Q9NP97 96 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 EMC7Q9NPA0 242 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 FZR1Q9UM11 496 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 COA3Q9Y2R0 106 aaPredicted RBP13.22□□□□□ -0.29
CPSF1-210ENST00000532935 TIMM10BQ9Y5J6 103 aa13.22□□□□□ -0.29
CPSF1-210ENST00000532935 ANK3Q12955 4377 aaKnown RBP13.22□□□□□ -0.29
CPSF1-210ENST00000532935 LOC100509620A0A075B734 347 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 IGFBP1P08833 259 aaPredicted RBP13.21□□□□□ -0.29
CPSF1-210ENST00000532935 ADRA2AP08913 450 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 HIST1H1CP16403 213 aaKnown RBP13.21□□□□□ -0.29
CPSF1-210ENST00000532935 CCNOP22674 350 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 RAD52P43351 418 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 GDI2P50395 445 aaKnown RBP13.21□□□□□ -0.29
CPSF1-210ENST00000532935 UCP2P55851 309 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 RGS7BPQ6MZT1 257 aaPredicted RBP13.21□□□□□ -0.29
CPSF1-210ENST00000532935 ZNF774Q6NX45 483 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 JAZF1Q86VZ6 243 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 GLB1L2Q8IW92 636 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 ALDH16A1Q8IZ83 802 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 ZCCHC24Q8N2G6 241 aaKnown RBP13.21□□□□□ -0.29
CPSF1-210ENST00000532935 C10orf105Q8TEF2 133 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 WACQ9BTA9 647 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 BCL2L14Q9BZR8 327 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 NUAK2Q9H093 628 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 EGLN3Q9H6Z9 239 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 REEP1Q9H902 201 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 MYEF2Q9P2K5 600 aaKnown RBP13.21□□□□□ -0.29
CPSF1-210ENST00000532935 SAMHD1Q9Y3Z3 626 aaKnown RBP13.21□□□□□ -0.29
CPSF1-210ENST00000532935 CDH10Q9Y6N8 788 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 U3KQV3 271 aa13.21□□□□□ -0.29
CPSF1-210ENST00000532935 DHRS12A0PJE2 317 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 C5orf49A4QMS7 147 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 M0R233 179 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 SYNGR3O43761 229 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 IDH3BO43837 385 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 GASTP01350 101 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 LCKP06239 509 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 ERCC1P07992 297 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-210ENST00000532935 NOS3P29474 1203 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 CRABP1P29762 137 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 PDLIM4P50479 330 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 MICAQ29983 383 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 RPL13AP3Q6NVV1 102 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 LEG1Q6P5S2 330 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 DNM1P34Q6PK57 102 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 AQP11Q8NBQ7 271 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 OR52L1Q8NGH7 329 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 OR4K13Q8NH42 304 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 CANT1Q8WVQ1 401 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 NEU4Q8WWR8 484 aaPredicted RBP13.2□□□□□ -0.3
CPSF1-210ENST00000532935 TSSK2Q96PF2 358 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 SNX18Q96RF0 628 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 NMNAT3Q96T66 252 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 CHID1Q9BWS9 393 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 REV1Q9UBZ9 1251 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 DUSP13Q9UII6 198 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 HIVEP2P31629 2446 aa13.2□□□□□ -0.3
CPSF1-210ENST00000532935 A0A096LNT2 108 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 DCTN6O00399 190 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 MPZL1O95297 269 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 RENP00797 406 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 CST1P01037 141 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 ZNF250P15622 560 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 SLC25A16P16260 332 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 WNT5AP41221 380 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 ALDH3B1P43353 468 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 ERVS71-1P61550 626 aa13.19□□□□□ -0.3
CPSF1-210ENST00000532935 LSM6P62312 80 aaKnown RBP13.19□□□□□ -0.3
CPSF1-210ENST00000532935 SCRN3Q0VDG4 424 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms