RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 PAQR4Q8N4S7 273 aaPredicted RBP17.15■□□□□ 0.34
CPSF1-209ENST00000532725 WFDC11Q8NEX6 87 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 SDR9C7Q8NEX9 313 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 AKR7LQ8NHP1 331 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 TRMT61AQ96FX7 289 aaKnown RBP17.15■□□□□ 0.34
CPSF1-209ENST00000532725 WNT5BQ9H1J7 359 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 RPRD1BQ9NQG5 326 aaKnown RBP17.15■□□□□ 0.34
CPSF1-209ENST00000532725 TBC1D23Q9NUY8 699 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 BAIAP2Q9UQB8 552 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 SPEF1Q9Y4P9 236 aa17.15■□□□□ 0.34
CPSF1-209ENST00000532725 SNAP29O95721 258 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 GPANK1O95872 356 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 GLRXP35754 106 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 ATP5J2P56134 94 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 SNTB2Q13425 540 aaKnown RBP17.14■□□□□ 0.33
CPSF1-209ENST00000532725 EFNB3Q15768 340 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 SLC36A3Q495N2 470 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 OTPQ5XKR4 325 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 DNM1P34Q6PK57 102 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 TGIF2LYQ8IUE0 185 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 LURAP1LQ8IV03 231 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 OR2T33Q8NG76 320 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 OR1J2Q8NGS2 313 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 C11orf40Q8WZ69 217 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 POM121L2Q96KW2 1035 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 RACGAP1Q9H0H5 632 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 FKBP7Q9Y680 259 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 VPS13CQ709C8 3753 aa17.14■□□□□ 0.33
CPSF1-209ENST00000532725 LOC100509620A0A075B734 347 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 TMEM129A0AVI4 362 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 VSTM5A8MXK1 200 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 B9A039 149 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 GAAP10253 952 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 FASP25445 335 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 STOMP27105 288 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 ACTR3P61158 418 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 GALK2Q01415 458 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 MSMPQ1L6U9 139 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 TBC1D28Q2M2D7 210 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 ALDH16A1Q8IZ83 802 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 CYB561A3Q8NBI2 242 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 OR5K1Q8NHB7 308 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 CACNG6Q9BXT2 260 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 FN3KQ9H479 309 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 ZNF556Q9HAH1 456 aa17.13■□□□□ 0.33
CPSF1-209ENST00000532725 ARFGEF3Q5TH69 2177 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 GPRIN2O60269 458 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 NDUFS7O75251 213 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 TFP02787 698 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 OSMP13725 252 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 PCSK6P29122 969 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 APLNRP35414 380 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 CENPAP49450 140 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 Q5PR19 223 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 ZNF774Q6NX45 483 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 FAHD1Q6P587 224 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 YTHDF3Q7Z739 585 aaKnown RBP17.12■□□□□ 0.33
CPSF1-209ENST00000532725 AMIGO2Q86SJ2 522 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 SLC37A3Q8NCC5 494 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 LRTOMTQ8WZ04 291 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 DOK1Q99704 481 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 BDH2Q9BUT1 245 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 RBM4Q9BWF3 364 aaKnown RBP17.12■□□□□ 0.33
CPSF1-209ENST00000532725 PLK3Q9H4B4 646 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 CDH20Q9HBT6 801 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 KLHL21Q9UJP4 597 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 GDF2Q9UK05 429 aaPredicted RBP17.12■□□□□ 0.33
CPSF1-209ENST00000532725 CMAHPQ9Y471 501 aa17.12■□□□□ 0.33
CPSF1-209ENST00000532725 ACANP16112 2415 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 FAM171A2A8MVW0 826 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 H3BN98 237 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 H7C417 338 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 IGHV4-39P01824 125 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 BMP4P12644 408 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 DAPP51397 102 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 UCP2P55851 309 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 GLO1Q04760 184 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 KPNB1Q14974 876 aaKnown RBP17.11■□□□□ 0.33
CPSF1-209ENST00000532725 MEP1BQ16820 701 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 ACSM5Q6NUN0 579 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 IQCF1Q8N6M8 205 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 ATG16L2Q8NAA4 619 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 SLC26A10Q8NG04 563 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 TEX47Q8TBZ9 253 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 ZNRF4Q8WWF5 429 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 TMUB1Q9BVT8 246 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 NMNAT2Q9BZQ4 307 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 PMF1-BGLAPU3KQ54 211 aa17.11■□□□□ 0.33
CPSF1-209ENST00000532725 G3V2T6 193 aa17.1■□□□□ 0.33
CPSF1-209ENST00000532725 COX5BP10606 129 aa17.1■□□□□ 0.33
CPSF1-209ENST00000532725 FCGR1AP12314 374 aa17.1■□□□□ 0.33
CPSF1-209ENST00000532725 POU1F1P28069 291 aa17.1■□□□□ 0.33
CPSF1-209ENST00000532725 GRK5P34947 590 aa17.1■□□□□ 0.33
CPSF1-209ENST00000532725 RAD52P43351 418 aa17.1■□□□□ 0.33
CPSF1-209ENST00000532725 GDI2P50395 445 aaKnown RBP17.1■□□□□ 0.33
CPSF1-209ENST00000532725 HIST1H3AP68431 136 aa17.1■□□□□ 0.33
CPSF1-209ENST00000532725 CDK5Q00535 292 aa17.1■□□□□ 0.33
CPSF1-209ENST00000532725 TEKQ02763 1124 aa17.1■□□□□ 0.33
CPSF1-209ENST00000532725 SCRN3Q0VDG4 424 aa17.1■□□□□ 0.33
CPSF1-209ENST00000532725 AQP6Q13520 282 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms