RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CLDN22Q8N7P3 220 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 OR14K1Q8NGZ2 314 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 LGALS14Q8TCE9 139 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 SGK3Q96BR1 496 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 SPNS1Q9H2V7 528 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 ZFP64Q9NPA5 681 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 SLC22A11Q9NSA0 550 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 TTC3P53804 2025 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 TRIP12Q14669 1992 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-221ENST00000532331 LUMP51884 338 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-221ENST00000532331 ZNF136P52737 540 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 FCRL6Q6DN72 434 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 OR52N5Q8NH56 324 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 RPL3LQ92901 407 aaKnown RBP10.28□□□□□ -0.76
PTPRK-221ENST00000532331 OR2M2Q96R28 347 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 HIPK2Q9H2X6 1198 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 PPP1R14DQ9NXH3 145 aa10.28□□□□□ -0.76
PTPRK-221ENST00000532331 ANKRD34BA5PLL1 514 aa10.27□□□□□ -0.76
PTPRK-221ENST00000532331 CNR1P21554 472 aa10.27□□□□□ -0.76
PTPRK-221ENST00000532331 TBXA2RP21731 343 aa10.27□□□□□ -0.76
PTPRK-221ENST00000532331 RBMS2Q15434 407 aaKnown RBP10.27□□□□□ -0.76
PTPRK-221ENST00000532331 ZNF385BQ569K4 471 aa10.27□□□□□ -0.76
PTPRK-221ENST00000532331 M1APQ8TC57 530 aa10.27□□□□□ -0.76
PTPRK-221ENST00000532331 Q96M85 177 aa10.27□□□□□ -0.76
PTPRK-221ENST00000532331 ASB1Q9Y576 335 aa10.27□□□□□ -0.76
PTPRK-221ENST00000532331 LILRB5O75023 590 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 PAPLNO95428 1278 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 SOX8P57073 446 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 PPP1CAP62136 330 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 BLOC1S1P78537 153 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF718Q3SXZ3 478 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 C9orf152Q5JTZ5 239 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 THEM4Q5T1C6 240 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 AADACL3Q5VUY0 350 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 Q6ZTK2 550 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 COMTD1Q86VU5 262 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 D2HGDHQ8N465 521 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 DNAJC5GQ8N7S2 189 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 NKAIN3Q8N8D7 197 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 OR5D18Q8NGL1 313 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 UCK1Q9HA47 277 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 PILRBQ9UKJ0 227 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 B3GALT5Q9Y2C3 310 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 ETV7Q9Y603 341 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 TRIM64CA6NLI5 447 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 GABRA1P14867 456 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF26P17031 533 aaPredicted RBP10.27□□□□□ -0.77
PTPRK-221ENST00000532331 NFYAP23511 347 aaPredicted RBP10.27□□□□□ -0.77
PTPRK-221ENST00000532331 CPT2P23786 658 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 RAB5BP61020 215 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 NKAIN4Q8IVV8 208 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 OR4D6Q8NGJ1 314 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 S100PBPQ96BU1 408 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 FGGYQ96C11 551 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 SDSLQ96GA7 329 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 GCM1Q9NP62 436 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 TAS2R16Q9NYV7 291 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 KIF25Q9UIL4 384 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 KNL1Q8NG31 2342 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 C5orf49A4QMS7 147 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 ABCD3P28288 659 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 ZNF93P35789 620 aaPredicted RBP10.27□□□□□ -0.77
PTPRK-221ENST00000532331 CD79BP40259 229 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 RAB4BP61018 213 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 S100A7AQ86SG5 101 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 LINC01555Q8NAE3 123 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 OR14A2Q96R54 314 aa10.27□□□□□ -0.77
PTPRK-221ENST00000532331 TMEM82A0PJX8 343 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 F8W036 122 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 HSPB6O14558 160 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 PTGER4P35408 488 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 F2RL1P55085 397 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 RNPS1Q15287 305 aaKnown RBP10.26□□□□□ -0.77
PTPRK-221ENST00000532331 SLC9A3R2Q15599 337 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 LPCAT3Q6P1A2 487 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 WDR88Q6ZMY6 472 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 RBM45Q8IUH3 476 aaKnown RBP10.26□□□□□ -0.77
PTPRK-221ENST00000532331 CISD2Q8N5K1 135 aaKnown RBP10.26□□□□□ -0.77
PTPRK-221ENST00000532331 OR10G3Q8NGC4 313 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 FBXO17Q96EF6 278 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 NAA50Q9GZZ1 169 aaKnown RBP10.26□□□□□ -0.77
PTPRK-221ENST00000532331 KCNE1BA0A087WTH5 132 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 SELENOFO60613 162 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 AGFG1P52594 562 aaKnown RBP10.26□□□□□ -0.77
PTPRK-221ENST00000532331 RSPO4Q2I0M5 234 aaPredicted RBP10.26□□□□□ -0.77
PTPRK-221ENST00000532331 LYPD4Q6UWN0 246 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 NLRC3Q7RTR2 1065 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 OR56B4Q8NH76 319 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 RNF170Q96K19 258 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 GALNT9Q9HCQ5 603 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 SLC22A23A1A5C7 686 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 SPINT1O43278 529 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 ETHE1O95571 254 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 GP1BAP07359 652 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 FAM157BP0CG42 384 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 NAGAP17050 411 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 MAP2K6P52564 334 aa10.26□□□□□ -0.77
PTPRK-221ENST00000532331 KRBOX4Q5JUW0 171 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms