RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 ETV7Q9Y603 341 aa12.83□□□□□ -0.36
USP48-213ENST00000529637 A0A1B0GTI1 187 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 ELOA3DA6NLF2 546 aaPredicted RBP12.82□□□□□ -0.36
USP48-213ENST00000529637 CLDN4O14493 209 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 ITGA5P08648 1049 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 HOXC4P09017 264 aaPredicted RBP12.82□□□□□ -0.36
USP48-213ENST00000529637 THEGLP0DJG4 465 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 AKR1C3P42330 323 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 POU3F4P49335 361 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 ELOA3BQ3SY89 546 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 AKIRIN2Q53H80 203 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 RHOUQ7L0Q8 258 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 SLC22A18ASQ8N1D0 253 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 ELOA3Q8NG57 546 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 OR5AK2Q8NH90 309 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 SLC22A8Q8TCC7 542 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 EDARADDQ8WWZ3 215 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 TMEM106AQ96A25 262 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 CTHRC1Q96CG8 243 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 CDCA3Q99618 268 aaPredicted RBP12.82□□□□□ -0.36
USP48-213ENST00000529637 SLITRK2Q9H156 845 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 ACKR4Q9NPB9 350 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 WDR87Q6ZQQ6 2873 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 A0A1W2PPE3 182 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 EIF1BO60739 113 aaKnown RBP12.82□□□□□ -0.36
USP48-213ENST00000529637 UPK3AO75631 287 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 IFNA4P05014 189 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 AVPR2P30518 371 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 PRSS3P35030 304 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 EIF1P41567 113 aaKnown RBP12.82□□□□□ -0.36
USP48-213ENST00000529637 GPR143P51810 404 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 LBX1P52954 281 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 SCGB2B2Q4G0G5 96 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 C10orf91Q5T1B1 145 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 ZNF684Q5T5D7 378 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 LEG1Q6P5S2 330 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 ACOT7LQ6ZUV0 252 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 GTPBP8Q8N3Z3 284 aaPredicted RBP12.82□□□□□ -0.36
USP48-213ENST00000529637 DEFB119Q8N690 84 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 LMF1Q96S06 567 aa12.82□□□□□ -0.36
USP48-213ENST00000529637 SRA1Q9HD15 236 aaKnown RBP12.82□□□□□ -0.36
USP48-213ENST00000529637 MRM2Q9UI43 246 aaKnown RBP12.82□□□□□ -0.36
USP48-213ENST00000529637 A0A1B0GTQ1 180 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 WNT11O96014 354 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 AMY2AP04746 511 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 YPEL5P62699 121 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 ZNF345Q14585 488 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 INPP5JQ15735 1006 aaPredicted RBP12.81□□□□□ -0.36
USP48-213ENST00000529637 ARHGAP40Q5TG30 622 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 ZNF813Q6ZN06 617 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 OR5AP2Q8NGF4 316 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 OR10R2Q8NGX6 335 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 OR6S1Q8NH40 331 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 CCDC74AQ96AQ1 378 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 SELENOIQ9C0D9 397 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 IKZF2Q9UKS7 526 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 CARHSP1Q9Y2V2 147 aaKnown RBP12.81□□□□□ -0.36
USP48-213ENST00000529637 COLCA2A8K830 154 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 TGFBR3LH3BV60 316 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 HLA-AP01891 365 aaKnown RBP12.81□□□□□ -0.36
USP48-213ENST00000529637 ZNF28P17035 718 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 CD34P28906 385 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 AQP2P41181 271 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 GRK6P43250 576 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 NR0B1P51843 470 aaKnown RBP12.81□□□□□ -0.36
USP48-213ENST00000529637 NPSR1Q6W5P4 371 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 FAM122BQ7Z309 247 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 JAZF1Q86VZ6 243 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 FAM219AQ8IW50 185 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 C16orf52Q8NHV5 167 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 TMED6Q8WW62 240 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 MRPL48Q96GC5 212 aaKnown RBP12.81□□□□□ -0.36
USP48-213ENST00000529637 GAS2L1Q99501 681 aaPredicted RBP12.81□□□□□ -0.36
USP48-213ENST00000529637 POLE3Q9NRF9 147 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 TAS2R8Q9NYW2 309 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 COMMD9Q9P000 198 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 MBD2Q9UBB5 411 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 SPTBN5Q9NRC6 3674 aaKnown RBP12.81□□□□□ -0.36
USP48-213ENST00000529637 H7C1C5 153 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 RAB3DO95716 219 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 F13BP05160 661 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 RD3LP0DJH9 198 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 GABRG2P18507 467 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 RBM34P42696 430 aaKnown RBP12.81□□□□□ -0.36
USP48-213ENST00000529637 RABIFP47224 123 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 LCN6P62502 163 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 TGIF1Q15583 401 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 NKPD1Q17RQ9 610 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 C2orf76Q3KRA6 126 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 LINC01590Q5TEZ4 76 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 C19orf47Q8N9M1 422 aaKnown RBP12.81□□□□□ -0.36
USP48-213ENST00000529637 PHYHIPLQ96FC7 376 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 SPSB2Q99619 263 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 MAP3K3Q99759 626 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 ALX4Q9H161 411 aaPredicted RBP12.81□□□□□ -0.36
USP48-213ENST00000529637 UQCC1Q9NVA1 299 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 MIOXQ9UGB7 285 aa12.81□□□□□ -0.36
USP48-213ENST00000529637 CABIN1Q9Y6J0 2220 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 SPEGQ15772 3267 aa12.8□□□□□ -0.36
USP48-213ENST00000529637 KIR2DS5A0A0G2JLQ3 304 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms