RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 SLC1A7O00341 560 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 CDC42EP2O14613 210 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ADAM10O14672 748 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 HCRTR2O43614 444 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 CHP2O43745 196 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 PAGE4O60829 102 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 WBP4O75554 376 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 OR6B1O95007 311 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 SPDEFO95238 335 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ANGPTL1O95841 491 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 NUDT14O95848 222 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 IGHEP01854 428 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 APOA1P02647 267 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 HMGN1P05114 100 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 NGFRP08138 427 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 SELLP14151 372 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 MAKP20794 623 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 CSRP1P21291 193 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 TCEA1P23193 301 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 PTAFRP25105 342 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 DUSP1P28562 367 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 CD1BP29016 333 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 LCN1P31025 176 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 OMPP47874 163 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 IDH2P48735 452 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 POU3F4P49335 361 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 NUDT6P53370 316 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 GAS1P54826 345 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 MLLT10P55197 1068 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 NUP107P57740 925 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ISL1P61371 349 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 COPZ1P61923 177 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 SUMO2P61956 95 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 ESRRGP62508 458 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 CRYZQ08257 329 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 SRSF6Q13247 344 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 APOFQ13790 326 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 KEAP1Q14145 624 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 MAD2L1BPQ15013 274 aaPredicted RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 PTGES3Q15185 160 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 TGIF1Q15583 401 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 TSC22D1Q15714 1073 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 TOMM34Q15785 309 aaPredicted RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 EXT1Q16394 746 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 SMN1Q16637 294 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 ZSWIM7Q19AV6 140 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 HFEQ30201 348 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 FAM76BQ5HYJ3 339 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ALG10BQ5I7T1 473 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 C9orf152Q5JTZ5 239 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 CLVS2Q5SYC1 327 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 C6orf141Q5SZD1 244 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 SPATA46Q5T0L3 261 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 THEM4Q5T1C6 240 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ATP1A1-AS1Q5TC04 95 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 LAIR2Q6ISS4 152 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ACSM5Q6NUN0 579 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 C1orf94Q6P1W5 598 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ZNF613Q6PF04 617 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 IL20RBQ6UXL0 311 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 MBOAT2Q6ZWT7 520 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 SLC46A3Q7Z3Q1 461 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 MRGPREQ86SM8 312 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 VASH2Q86V25 355 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 LINC00346Q8IVM7 164 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ZNF440Q8IYI8 595 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ENTHD1Q8IYW4 607 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ZNF679Q8IYX0 411 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 PARP8Q8N3A8 854 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 LINC00471Q8N535 108 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 SIRT6Q8N6T7 355 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 BHLHE23Q8NDY6 225 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 BPIFB6Q8NFQ5 453 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 OR10G3Q8NGC4 313 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 OR5L2Q8NGL0 311 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 OR8D4Q8NGM9 314 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ZNF563Q8TA94 476 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 M1APQ8TC57 530 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 FANK1Q8TC84 345 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 C2CD4CQ8TF44 421 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 DUSP19Q8WTR2 217 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 TMEM239Q8WW34 195 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 APH1BQ8WW43 257 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ACOT11Q8WXI4 607 aaPredicted RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 NR4A3Q92570 626 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 MED30Q96HR3 178 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 FER1L6-AS2Q96M78 137 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 IL4I1Q96RQ9 567 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 RASL10BQ96S79 203 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 APOL4Q9BPW4 351 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 PIMREGQ9BSJ6 248 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 MRPS26Q9BYN8 205 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 POLR2J2Q9GZM3 115 aaKnown RBP3.73□□□□□ -1.81
CD44-226ENST00000527889 NDEL1Q9GZM8 345 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 LAT2Q9GZY6 243 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 HOXD1Q9GZZ0 328 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 ANKRD19PQ9H560 264 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 EXO5Q9H790 373 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 MMP25Q9NPA2 562 aa3.73□□□□□ -1.81
CD44-226ENST00000527889 IMPAD1Q9NX62 359 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms