RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 TBC1D3Q8IZP1 549 aaPredicted RBP11.32□□□□□ -0.6
TSKU-203ENST00000527881 MITD1Q8WV92 249 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 ASB17Q8WXJ9 295 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TGM7Q96PF1 710 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 S100A13Q99584 98 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 ZNF426Q9BUY5 554 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 KCNJ16Q9NPI9 418 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 CKLFQ9UBR5 152 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 OR52A4PA6NMU1 304 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 C4orf47A7E2U8 309 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 H7C1C5 153 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 OR10H2O60403 315 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 ADAP1O75689 374 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 SLC35G4P0C7Q5 338 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 ATXN8OSP0DMR3 200 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 NR2C1P13056 603 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 NID1P14543 1247 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 CTNNB1P35222 781 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 ACTR1BP42025 376 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 LCN6P62502 163 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 DUSP8Q13202 625 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 DCST2Q5T1A1 773 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 VN1R2Q8NFZ6 395 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 OR13C9Q8NGT0 318 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 ZNF563Q8TA94 476 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 JSRP1Q96MG2 331 aaPredicted RBP11.31□□□□□ -0.6
TSKU-203ENST00000527881 INTS14Q96SY0 518 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 PCBD2Q9H0N5 130 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 MKKSQ9NPJ1 570 aaPredicted RBP11.31□□□□□ -0.6
TSKU-203ENST00000527881 KLHDC2Q9Y2U9 406 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 MYOFQ9NZM1 2061 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 PPIHO43447 177 aaKnown RBP11.31□□□□□ -0.6
TSKU-203ENST00000527881 MOSPD3O75425 235 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 ZNF84P51523 738 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 SQSTM1Q13501 440 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 SLC25A42Q86VD7 318 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 LRRC25Q8N386 305 aaPredicted RBP11.31□□□□□ -0.6
TSKU-203ENST00000527881 BHLHE23Q8NDY6 225 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 DTD2Q96FN9 168 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 INSM2Q96T92 566 aaPredicted RBP11.31□□□□□ -0.6
TSKU-203ENST00000527881 UNKLQ9H9P5 680 aaKnown RBP11.31□□□□□ -0.6
TSKU-203ENST00000527881 OR5AC2Q9NZP5 309 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 FBXO7Q9Y3I1 522 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 SCN2AQ99250 2005 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 DBX1A6NMT0 343 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 GRXCR1A8MXD5 290 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 PPP1R2P9O14990 202 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 DOK2O60496 412 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 TMEM127O75204 238 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 BCL6P41182 706 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 SPCS3P61009 180 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 CCINQ13939 588 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 MEF2DQ14814 521 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 UNQ6494/PRO21346Q6UXR6 183 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 TRAPPC6BQ86SZ2 158 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 BIVMQ86UB2 503 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 TMEM25Q86YD3 366 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 ZNF547Q8IVP9 402 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 GVQW1Q8N7I0 195 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 DNAJA3Q96EY1 480 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 SLC17A9Q9BYT1 436 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 C8orf33Q9H7E9 229 aaPredicted RBP11.31□□□□□ -0.6
TSKU-203ENST00000527881 CYTL1Q9NRR1 136 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 TM7SF3Q9NS93 570 aa11.31□□□□□ -0.6
TSKU-203ENST00000527881 MRM2Q9UI43 246 aaKnown RBP11.31□□□□□ -0.6
TSKU-203ENST00000527881 VWA8A3KMH1 1905 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 ZNF726A6NNF4 738 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 C4orf51C9J302 202 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 LEFTY2O00292 366 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 PLGP00747 810 aaPredicted RBP11.3□□□□□ -0.6
TSKU-203ENST00000527881 GALTP07902 379 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 PI3P19957 117 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
TSKU-203ENST00000527881 RAP1AP62834 184 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 TMEM35AQ53FP2 167 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 AWAT2Q6E213 333 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 DPY19L4Q7Z388 723 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 OR1J1Q8NGS3 322 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 ZCCHC10Q8TBK6 192 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 ADAMTS17Q8TE56 1095 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 FAM46BQ96A09 425 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 RAB7BQ96AH8 199 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 SLC25A36Q96CQ1 311 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 MS4A6EQ96DS6 147 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 SLC41A2Q96JW4 573 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 FOXN4Q96NZ1 517 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 DPEP2Q9H4A9 486 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 DOK5Q9P104 306 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 PISDQ9UG56 409 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 CHRNA9Q9UGM1 479 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 Q9Y3F1 56 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 A0A1W2PPC1 479 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 CD1AP06126 327 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 SPARCP09486 303 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 PAX6P26367 422 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 PPICP45877 212 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 NKX6-1P78426 367 aaPredicted RBP11.3□□□□□ -0.6
TSKU-203ENST00000527881 PMPCAQ10713 525 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 BIKQ13323 160 aa11.3□□□□□ -0.6
TSKU-203ENST00000527881 TRMT12Q53H54 448 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms