RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 DAG1Q14118 895 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 KRT80Q6KB66 452 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 RPL13AP3Q6NVV1 102 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 CLEC2AQ6UVW9 174 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 PTCHD4Q6ZW05 846 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 AQP11Q8NBQ7 271 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 SLC30A7Q8NEW0 376 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 FBXO17Q96EF6 278 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 C1orf198Q9H425 327 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 POLE4Q9NR33 117 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 SPEF1Q9Y4P9 236 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 CDH10Q9Y6N8 788 aa16.45■□□□□ 0.22
PKP3-204ENST00000526971 IQCMA0A1B0GVH7 501 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 IDH3BO43837 385 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 SLC16A7O60669 478 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 KHDRBS3O75525 346 aaKnown RBP16.44■□□□□ 0.22
PKP3-204ENST00000526971 F12P00748 615 aaPredicted RBP16.44■□□□□ 0.22
PKP3-204ENST00000526971 PTHP01270 115 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 SCG5P05408 212 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 ZNF16P17020 682 aaPredicted RBP16.44■□□□□ 0.22
PKP3-204ENST00000526971 ZNF32P17041 273 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 MSR1P21757 451 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 SRSF2Q01130 221 aaKnown RBP16.44■□□□□ 0.22
PKP3-204ENST00000526971 EFNB3Q15768 340 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 PABPC1L2AQ5JQF8 200 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 RASSF6Q6ZTQ3 369 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 PAPD5Q8NDF8 572 aaKnown RBP16.44■□□□□ 0.22
PKP3-204ENST00000526971 DGCR6LQ9BY27 220 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 LRMDAQ9H2I8 198 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 MMADHCQ9H3L0 296 aaPredicted RBP16.44■□□□□ 0.22
PKP3-204ENST00000526971 EGLN3Q9H6Z9 239 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 YY1AP1Q9H869 796 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 CDC42EP3Q9UKI2 254 aa16.44■□□□□ 0.22
PKP3-204ENST00000526971 B9A039 149 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 H7C417 338 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 GNGT2O14610 69 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 LY6HO94772 140 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 GSTM3P21266 225 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 PCBD1P61457 104 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 GALK2Q01415 458 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 HSF2Q03933 536 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 ENDOGQ14249 297 aaKnown RBP16.43■□□□□ 0.22
PKP3-204ENST00000526971 CPEB3Q8NE35 698 aaKnown RBP16.43■□□□□ 0.22
PKP3-204ENST00000526971 OR10G2Q8NGC3 310 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 OR52L1Q8NGH7 329 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 OR1J2Q8NGS2 313 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 SNX18Q96RF0 628 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 NUAK2Q9H093 628 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 IL20Q9NYY1 176 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 TIMM10BQ9Y5J6 103 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 PMF1-BGLAPU3KQ54 211 aa16.43■□□□□ 0.22
PKP3-204ENST00000526971 C12orf71A8MTZ7 269 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 FKBP6O75344 327 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 IGHV4-31P0DP07 118 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 CCL2P13500 99 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 HIST1H1CP16403 213 aaKnown RBP16.42■□□□□ 0.22
PKP3-204ENST00000526971 NOS3P29474 1203 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 GLRXP35754 106 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 DSCR9P59020 149 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 SNRPD2P62316 118 aaKnown RBP16.42■□□□□ 0.22
PKP3-204ENST00000526971 CBX1P83916 185 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 PSG4Q00888 419 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 TBC1D28Q2M2D7 210 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 CLEC12AQ5QGZ9 265 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 LEG1Q6P5S2 330 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 UGT2A3Q6UWM9 527 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 SYT9Q86SS6 491 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 JAZF1Q86VZ6 243 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 GLB1L2Q8IW92 636 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 PAQR4Q8N4S7 273 aaPredicted RBP16.42■□□□□ 0.22
PKP3-204ENST00000526971 OR4K13Q8NH42 304 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 C10orf105Q8TEF2 133 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 GIPC3Q8TF64 312 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 SLCO4A1Q96BD0 722 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 FOXN4Q96NZ1 517 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 NMNAT3Q96T66 252 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 WACQ9BTA9 647 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 ZNF416Q9BWM5 594 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 PLA2G12AQ9BZM1 189 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 OR2H1Q9GZK4 316 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 PLK3Q9H4B4 646 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 RERGLQ9H628 205 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 CDH20Q9HBT6 801 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 EMC7Q9NPA0 242 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 TMEM160Q9NX00 188 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 COA3Q9Y2R0 106 aaPredicted RBP16.42■□□□□ 0.22
PKP3-204ENST00000526971 CMAHPQ9Y471 501 aa16.42■□□□□ 0.22
PKP3-204ENST00000526971 ARRDC5A6NEK1 342 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 BHLHE40O14503 412 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 SNAP29O95721 258 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 RENP00797 406 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 SLC25A16P16260 332 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 APEX1P27695 318 aaKnown RBP16.41■□□□□ 0.22
PKP3-204ENST00000526971 CRABP1P29762 137 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 APLNRP35414 380 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 ERFP50548 548 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 RAB35Q15286 201 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 DNM1P34Q6PK57 102 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 CD300LDQ6UXZ3 194 aa16.41■□□□□ 0.22
PKP3-204ENST00000526971 TMEM179BQ7Z7N9 219 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms