RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 MAGIXQ9H6Y5 334 aa17.7■□□□□ 0.42
VPS28-206ENST00000526734 YAE1D1Q9NRH1 226 aa17.7■□□□□ 0.42
VPS28-206ENST00000526734 IER3IP1Q9Y5U9 82 aa17.7■□□□□ 0.42
VPS28-206ENST00000526734 A8MV72 311 aaPredicted RBP17.69■□□□□ 0.42
VPS28-206ENST00000526734 ARPC3O15145 178 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 CRABP1P29762 137 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 MAGEA2P43356 314 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 FXYD6P3P58550 94 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 LSM6P62312 80 aaKnown RBP17.69■□□□□ 0.42
VPS28-206ENST00000526734 MRPS11P82912 194 aaKnown RBP17.69■□□□□ 0.42
VPS28-206ENST00000526734 GGTLC2Q14390 218 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 C6orf52Q5T4I8 152 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 CYB5R2Q6BCY4 276 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 THSD4Q6ZMP0 1018 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 GLB1L2Q8IW92 636 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 AKR7LQ8NHP1 331 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 RASD2Q96D21 266 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 ZNF416Q9BWM5 594 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 C1orf21Q9H246 121 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 SYT4Q9H2B2 425 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 TPK1Q9H3S4 243 aa17.69■□□□□ 0.42
VPS28-206ENST00000526734 C5orf49A4QMS7 147 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 IDH3BO43837 385 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 SLC16A7O60669 478 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 CTLA4P16410 223 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 ZNF23P17027 643 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 ATP6V1B2P21281 511 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 CCNOP22674 350 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 TUBG1P23258 451 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 ALDH3B1P43353 468 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 GSSP48637 474 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 HMGA2P52926 109 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 AQP6Q13520 282 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 TRIM25Q14258 630 aaKnown RBP17.68■□□□□ 0.42
VPS28-206ENST00000526734 RFX4Q33E94 735 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 PCGF3Q3KNV8 242 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 RPL13AP3Q6NVV1 102 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 C1orf94Q6P1W5 598 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 CYP2R1Q6VVX0 501 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 LRP11Q86VZ4 500 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 DHFR2Q86XF0 187 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 ZCCHC24Q8N2G6 241 aaKnown RBP17.68■□□□□ 0.42
VPS28-206ENST00000526734 OR1J1Q8NGS3 322 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 GNPDA2Q8TDQ7 276 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 GPA33Q99795 319 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 TRIM15Q9C019 465 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 BPESC1Q9GZL8 116 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 OR52D1Q9H346 318 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 ELOVL3Q9HB03 270 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 HINT3Q9NQE9 182 aaKnown RBP17.68■□□□□ 0.42
VPS28-206ENST00000526734 TUBG2Q9NRH3 451 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 TMEM160Q9NX00 188 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 NKIRAS2Q9NYR9 191 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 ATPIF1Q9UII2 106 aa17.68■□□□□ 0.42
VPS28-206ENST00000526734 ABCA1O95477 2261 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 LOC100509620A0A075B734 347 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 SOCS2O14508 198 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 IGHV3-13P01766 116 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 GCH1P30793 250 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 ARHGDIAP52565 204 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 TSPAN31Q12999 210 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 ZNF718Q3SXZ3 478 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 TMEM154Q6P9G4 183 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 UGT2A3Q6UWM9 527 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 JAZF1Q86VZ6 243 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 RDH5Q92781 318 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 ERMAPQ96PL5 475 aaPredicted RBP17.67■□□□□ 0.42
VPS28-206ENST00000526734 TAAR3PQ9P1P4 343 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 MYEF2Q9P2K5 600 aaKnown RBP17.67■□□□□ 0.42
VPS28-206ENST00000526734 CGGBP1Q9UFW8 167 aaPredicted RBP17.67■□□□□ 0.42
VPS28-206ENST00000526734 FZR1Q9UM11 496 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 ABCA2Q9BZC7 2435 aa17.67■□□□□ 0.42
VPS28-206ENST00000526734 SGCEO43556 437 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 RENP00797 406 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 TACSTD2P09758 323 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 IGHV4-31P0DP07 118 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 HOXB6P17509 224 aaKnown RBP17.66■□□□□ 0.42
VPS28-206ENST00000526734 ACHEP22303 614 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 CHN2P52757 468 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 RIN1Q13671 783 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 GK3PQ14409 553 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 MAD2L1BPQ15013 274 aaPredicted RBP17.66■□□□□ 0.42
VPS28-206ENST00000526734 KCNMB1Q16558 191 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 FAM98BQ52LJ0 330 aaKnown RBP17.66■□□□□ 0.42
VPS28-206ENST00000526734 ZNF774Q6NX45 483 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 NPEPL1Q8NDH3 523 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 ICA1LQ8NDH6 482 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 HPS1Q92902 700 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 ASB9Q96DX5 294 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 OR51B6Q9H340 312 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 CHODLQ9H9P2 273 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 EMC7Q9NPA0 242 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 FAM53CQ9NYF3 392 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 IL20RAQ9UHF4 553 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 LYVE1Q9Y5Y7 322 aa17.66■□□□□ 0.42
VPS28-206ENST00000526734 IGHV4-61A0A0C4DH41 118 aa17.65■□□□□ 0.42
VPS28-206ENST00000526734 TCRBV5S2A0A599 114 aa17.65■□□□□ 0.42
VPS28-206ENST00000526734 C17orf100A8MU93 164 aa17.65■□□□□ 0.42
VPS28-206ENST00000526734 TNFRSF11BO00300 401 aa17.65■□□□□ 0.42
VPS28-206ENST00000526734 DOK2O60496 412 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms