RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 DSCR9P59020 149 aa8.8□□□□□ -1
VPS28-204ENST00000526054 TUBA1BP68363 451 aa8.8□□□□□ -1
VPS28-204ENST00000526054 TUBA4AP68366 448 aa8.8□□□□□ -1
VPS28-204ENST00000526054 SLC34A1Q06495 639 aa8.8□□□□□ -1
VPS28-204ENST00000526054 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.8□□□□□ -1
VPS28-204ENST00000526054 GSG1Q2KHT4 349 aa8.8□□□□□ -1
VPS28-204ENST00000526054 C3orf36Q3SXR2 165 aa8.8□□□□□ -1
VPS28-204ENST00000526054 CHRFAM7AQ494W8 412 aa8.8□□□□□ -1
VPS28-204ENST00000526054 SLC36A2Q495M3 483 aa8.8□□□□□ -1
VPS28-204ENST00000526054 C6orf52Q5T4I8 152 aa8.8□□□□□ -1
VPS28-204ENST00000526054 C11orf71Q6IPW1 123 aa8.8□□□□□ -1
VPS28-204ENST00000526054 FAHD1Q6P587 224 aa8.8□□□□□ -1
VPS28-204ENST00000526054 LEG1Q6P5S2 330 aa8.8□□□□□ -1
VPS28-204ENST00000526054 B3GLCTQ6Y288 498 aa8.8□□□□□ -1
VPS28-204ENST00000526054 PTCHD4Q6ZW05 846 aa8.8□□□□□ -1
VPS28-204ENST00000526054 TUBA1AQ71U36 451 aa8.8□□□□□ -1
VPS28-204ENST00000526054 SLC16A14Q7RTX9 510 aa8.8□□□□□ -1
VPS28-204ENST00000526054 FBXL14Q8N1E6 418 aa8.8□□□□□ -1
VPS28-204ENST00000526054 DEPDC4Q8N2C3 294 aa8.8□□□□□ -1
VPS28-204ENST00000526054 PQLC1Q8N2U9 271 aa8.8□□□□□ -1
VPS28-204ENST00000526054 MUC15Q8N387 334 aa8.8□□□□□ -1
VPS28-204ENST00000526054 LNX2Q8N448 690 aa8.8□□□□□ -1
VPS28-204ENST00000526054 ICA1LQ8NDH6 482 aa8.8□□□□□ -1
VPS28-204ENST00000526054 OR52E2Q8NGJ4 325 aa8.8□□□□□ -1
VPS28-204ENST00000526054 KCNS3Q9BQ31 491 aa8.8□□□□□ -1
VPS28-204ENST00000526054 OSBPL10Q9BXB5 764 aa8.8□□□□□ -1
VPS28-204ENST00000526054 C1QTNF6Q9BXI9 259 aa8.8□□□□□ -1
VPS28-204ENST00000526054 TEX12Q9BXU0 123 aa8.8□□□□□ -1
VPS28-204ENST00000526054 KCNN2Q9H2S1 579 aa8.8□□□□□ -1
VPS28-204ENST00000526054 SEC61A2Q9H9S3 476 aa8.8□□□□□ -1
VPS28-204ENST00000526054 SIAEQ9HAT2 523 aa8.8□□□□□ -1
VPS28-204ENST00000526054 KRT84Q9NSB2 600 aa8.8□□□□□ -1
VPS28-204ENST00000526054 REV1Q9UBZ9 1251 aa8.8□□□□□ -1
VPS28-204ENST00000526054 ENOPH1Q9UHY7 261 aa8.8□□□□□ -1
VPS28-204ENST00000526054 KLHL21Q9UJP4 597 aa8.8□□□□□ -1
VPS28-204ENST00000526054 FBXL3Q9UKT7 428 aa8.8□□□□□ -1
VPS28-204ENST00000526054 STAB1Q9NY15 2570 aa8.8□□□□□ -1
VPS28-204ENST00000526054 IGKV1D-43A0A0B4J1Z2 117 aa8.79□□□□□ -1
VPS28-204ENST00000526054 SAC3D1A6NKF1 404 aa8.79□□□□□ -1
VPS28-204ENST00000526054 RIIAD1A6NNX1 92 aa8.79□□□□□ -1
VPS28-204ENST00000526054 GPRIN2O60269 458 aa8.79□□□□□ -1
VPS28-204ENST00000526054 SLC16A7O60669 478 aa8.79□□□□□ -1
VPS28-204ENST00000526054 HLA-HP01893 362 aa8.79□□□□□ -1
VPS28-204ENST00000526054 IGFBP1P08833 259 aaPredicted RBP8.79□□□□□ -1
VPS28-204ENST00000526054 CD79AP11912 226 aa8.79□□□□□ -1
VPS28-204ENST00000526054 CBR1P16152 277 aa8.79□□□□□ -1
VPS28-204ENST00000526054 CTLA4P16410 223 aa8.79□□□□□ -1
VPS28-204ENST00000526054 ZNF3P17036 446 aa8.79□□□□□ -1
VPS28-204ENST00000526054 MSR1P21757 451 aa8.79□□□□□ -1
VPS28-204ENST00000526054 GRK5P34947 590 aa8.79□□□□□ -1
VPS28-204ENST00000526054 CDKN2AP42771 156 aaKnown RBP8.79□□□□□ -1
VPS28-204ENST00000526054 FABP6P51161 128 aa8.79□□□□□ -1
VPS28-204ENST00000526054 RAB35Q15286 201 aa8.79□□□□□ -1
VPS28-204ENST00000526054 SGCAQ16586 387 aa8.79□□□□□ -1
VPS28-204ENST00000526054 TMEM249Q2WGJ8 235 aa8.79□□□□□ -1
VPS28-204ENST00000526054 SLC35F1Q5T1Q4 408 aa8.79□□□□□ -1
VPS28-204ENST00000526054 ZNF544Q6NX49 715 aa8.79□□□□□ -1
VPS28-204ENST00000526054 SLC27A4Q6P1M0 643 aa8.79□□□□□ -1
VPS28-204ENST00000526054 TMEM53Q6P2H8 277 aa8.79□□□□□ -1
VPS28-204ENST00000526054 FOXL2NBQ6ZUU3 175 aa8.79□□□□□ -1
VPS28-204ENST00000526054 MDP1Q86V88 176 aa8.79□□□□□ -1
VPS28-204ENST00000526054 SKA3Q8IX90 412 aa8.79□□□□□ -1
VPS28-204ENST00000526054 PARP8Q8N3A8 854 aa8.79□□□□□ -1
VPS28-204ENST00000526054 ZNF525Q8N782 197 aa8.79□□□□□ -1
VPS28-204ENST00000526054 FAM169BQ8N8A8 192 aa8.79□□□□□ -1
VPS28-204ENST00000526054 SDR9C7Q8NEX9 313 aa8.79□□□□□ -1
VPS28-204ENST00000526054 OR4Q3Q8NH05 313 aa8.79□□□□□ -1
VPS28-204ENST00000526054 HTRA1Q92743 480 aa8.79□□□□□ -1
VPS28-204ENST00000526054 SLC38A2Q96QD8 506 aa8.79□□□□□ -1
VPS28-204ENST00000526054 NMNAT3Q96T66 252 aa8.79□□□□□ -1
VPS28-204ENST00000526054 PKP2Q99959 881 aa8.79□□□□□ -1
VPS28-204ENST00000526054 RERGLQ9H628 205 aa8.79□□□□□ -1
VPS28-204ENST00000526054 CCNB1IP1Q9NPC3 277 aa8.79□□□□□ -1
VPS28-204ENST00000526054 CRNNQ9UBG3 495 aaPredicted RBP8.79□□□□□ -1
VPS28-204ENST00000526054 NKX1-2Q9UD57 310 aaPredicted RBP8.79□□□□□ -1
VPS28-204ENST00000526054 OAZ3Q9UMX2 235 aa8.79□□□□□ -1
VPS28-204ENST00000526054 UGT2A1Q9Y4X1 527 aa8.79□□□□□ -1
VPS28-204ENST00000526054 MXRA5Q9NR99 2828 aa8.78□□□□□ -1
VPS28-204ENST00000526054 A0A096LNT2 108 aa8.78□□□□□ -1
VPS28-204ENST00000526054 H7C417 338 aa8.78□□□□□ -1
VPS28-204ENST00000526054 IGKV3-15P01624 115 aa8.78□□□□□ -1
VPS28-204ENST00000526054 IGLV1-44P01699 117 aa8.78□□□□□ -1
VPS28-204ENST00000526054 HMGN1P05114 100 aa8.78□□□□□ -1
VPS28-204ENST00000526054 CECR9P0C854 216 aa8.78□□□□□ -1
VPS28-204ENST00000526054 SLC25A16P16260 332 aa8.78□□□□□ -1
VPS28-204ENST00000526054 IGFBP5P24593 272 aa8.78□□□□□ -1
VPS28-204ENST00000526054 LAP3P28838 519 aa8.78□□□□□ -1
VPS28-204ENST00000526054 CDAP32320 146 aa8.78□□□□□ -1
VPS28-204ENST00000526054 GIPRP48546 466 aa8.78□□□□□ -1
VPS28-204ENST00000526054 PTDSS1P48651 473 aaKnown RBP8.78□□□□□ -1
VPS28-204ENST00000526054 CENPAP49450 140 aa8.78□□□□□ -1
VPS28-204ENST00000526054 DAPP51397 102 aa8.78□□□□□ -1
VPS28-204ENST00000526054 IDH3GP51553 393 aaPredicted RBP8.78□□□□□ -1
VPS28-204ENST00000526054 ESRRGP62508 458 aa8.78□□□□□ -1
VPS28-204ENST00000526054 PIGFQ07326 219 aa8.78□□□□□ -1
VPS28-204ENST00000526054 NPRL3Q12980 569 aa8.78□□□□□ -1
VPS28-204ENST00000526054 GLB1L2Q8IW92 636 aa8.78□□□□□ -1
VPS28-204ENST00000526054 PHC2Q8IXK0 858 aa8.78□□□□□ -1
VPS28-204ENST00000526054 LRRC18Q8N456 261 aa8.78□□□□□ -1
VPS28-204ENST00000526054 IQCF1Q8N6M8 205 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms