RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 FOXL2NBQ6ZUU3 175 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 PTCHD4Q6ZW05 846 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 AMIGO2Q86SJ2 522 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 DTX2Q86UW9 622 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 C1orf174Q8IYL3 243 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 PARP8Q8N3A8 854 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 CYB561A3Q8NBI2 242 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 SLC37A3Q8NCC5 494 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 ICA1LQ8NDH6 482 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 GJC3Q8NFK1 279 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR8D4Q8NGM9 314 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR6K6Q8NGW6 343 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 LILRB1Q8NHL6 650 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 SNX33Q8WV41 574 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 IPCEF1Q8WWN9 437 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 PYDC1Q8WXC3 89 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 LRTOMTQ8WZ04 291 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 C11orf40Q8WZ69 217 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 UTP4Q969X6 686 aaKnown RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 NABP1Q96AH0 204 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 SLCO4A1Q96BD0 722 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 FBXO17Q96EF6 278 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 COG8Q96MW5 612 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 FOXN4Q96NZ1 517 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 RBM4BQ9BQ04 359 aaKnown RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 TRAF4Q9BUZ4 470 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 RBM4Q9BWF3 364 aaKnown RBP4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF416Q9BWM5 594 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 CACNG6Q9BXT2 260 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 PLA2G12AQ9BZM1 189 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 GRIP2Q9C0E4 1043 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR2H1Q9GZK4 316 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 HDHD2Q9H0R4 259 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 FN3KQ9H479 309 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 PLK3Q9H4B4 646 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 ELOVL3Q9HB03 270 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 EMC7Q9NPA0 242 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 CMC2Q9NRP2 79 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 PLEK2Q9NYT0 353 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF224Q9NZL3 707 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 ASH2LQ9UBL3 628 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 ATPIF1Q9UII2 106 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 B9D1Q9UPM9 204 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 PKDREJQ9NTG1 2253 aa4.68□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR6C68A6NDL8 312 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR6C6A6NF89 314 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SAC3D1A6NKF1 404 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 FAM171A2A8MVW0 826 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 H3BSA7 217 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 H7C417 338 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 M0R233 179 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 MMP7P09237 267 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SPARCP09486 303 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 CSF3P09919 207 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 DANCRP0C864 163 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 FAM157BP0CG42 384 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF35P13682 527 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SPI1P17947 270 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 PRKACGP22612 351 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 TUBG1P23258 451 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 PCSK6P29122 969 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 GCH1P30793 250 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 PYCR1P32322 319 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 THBS4P35443 961 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 GLRXP35754 106 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 CDKN1AP38936 164 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 EVX1P49640 407 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 RGS6P49758 472 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 PPOXP50336 477 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SLC25A1P53007 311 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 RAD23AP54725 363 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 UCP2P55851 309 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 KLF3P57682 345 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 RPS7P62081 194 aaKnown RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 PSG4Q00888 419 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 TEKQ02763 1124 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 HGFACQ04756 655 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ECH1Q13011 328 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ENDOGQ14249 297 aaKnown RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 GINS1Q14691 196 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 TAF13Q15543 124 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ADIPOQQ15848 244 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SNAPC1Q16533 368 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 KCNMB1Q16558 191 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZSCAN26Q16670 478 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 NKPD1Q17RQ9 610 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF718Q3SXZ3 478 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZMAT1Q5H9K5 638 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ELFN2Q5R3F8 820 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 LCN1P1Q5VSP4 162 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF774Q6NX45 483 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 FAHD1Q6P587 224 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 CLEC2AQ6UVW9 174 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 UGT2A3Q6UWM9 527 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 PRSS57Q6UWY2 283 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SPNS3Q6ZMD2 512 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 TMEM179BQ7Z7N9 219 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZBTB46Q86UZ6 589 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 MYPOPQ86VE0 399 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF584Q8IVC4 421 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms