RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 HEXAP06865 529 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 ZNF250P15622 560 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 SLC25A16P16260 332 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 CDKN2AP42771 156 aaKnown RBP17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 UCP2P55851 309 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 LCN6P62502 163 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 SCRN3Q0VDG4 424 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 CD300LDQ6UXZ3 194 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 PTCHD4Q6ZW05 846 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 SORCS2Q96PQ0 1159 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 ZNF416Q9BWM5 594 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 CHID1Q9BWS9 393 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 RACGAP1Q9H0H5 632 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 MMADHCQ9H3L0 296 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 IL20RAQ9UHF4 553 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 ATPIF1Q9UII2 106 aa17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 SAMHD1Q9Y3Z3 626 aaKnown RBP17.98■□□□□ 0.47
TRAPPC9-215ENST00000524162 IGLV3-9A0A075B6K5 115 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 H3BSA7 217 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 GPRIN2O60269 458 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 SLC16A7O60669 478 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 PPP1R3DO95685 299 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 TUBG1P23258 451 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 COX10Q12887 443 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 AQP6Q13520 282 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 FLOT2Q14254 428 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 ZBTB46Q86UZ6 589 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 SVOPLQ8N434 492 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 OR52L1Q8NGH7 329 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 CANT1Q8WVQ1 401 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 SAMD8Q96LT4 415 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 IFT27Q9BW83 186 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 MRPL37Q9BZE1 423 aaKnown RBP17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 NUAK2Q9H093 628 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 WNT5BQ9H1J7 359 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 YY1AP1Q9H869 796 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 TUBG2Q9NRH3 451 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 NDRG4Q9ULP0 352 aaKnown RBP17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 BAIAP2Q9UQB8 552 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 POMPQ9Y244 141 aa17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 FN1P02751 2386 aaKnown RBP17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRAPPC9-215ENST00000524162 SONP18583 2426 aaKnown RBP17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 TCRBV3S1A0A5B6 114 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 M0R233 179 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 GSC2O15499 205 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 RENP00797 406 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 GASTP01350 101 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 APEX1P27695 318 aaKnown RBP17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 GDI2P50395 445 aaKnown RBP17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 SELENOVP59797 346 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 MSMPQ1L6U9 139 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 RGS7BPQ6MZT1 257 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 CLEC9AQ6UXN8 241 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 PAQR4Q8N4S7 273 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 PAPD5Q8NDF8 572 aaKnown RBP17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 OR9Q2Q8NGE9 314 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 C10orf105Q8TEF2 133 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 IPCEF1Q8WWN9 437 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 FAM168AQ92567 244 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 GPR160Q9UJ42 338 aa17.96■□□□□ 0.47
TRAPPC9-215ENST00000524162 LOC100509620A0A075B734 347 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 IGLV1-36A0A0B4J1U3 117 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 LOC390937A0A1W2PQ73 354 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 BHLHE40O14503 412 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 CST1P01037 141 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 HIST1H1CP16403 213 aaKnown RBP17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 NOS3P29474 1203 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 MOGQ16653 247 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 ARL9Q6T311 187 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 JAZF1Q86VZ6 243 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 LNX2Q8N448 690 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 ZNF525Q8N782 197 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 AQP11Q8NBQ7 271 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 C11orf40Q8WZ69 217 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 VRK1Q99986 396 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 GSX1Q9H4S2 264 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 SLCO1C1Q9NYB5 712 aa17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 EIF3KQ9UBQ5 218 aaKnown RBP17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 COA3Q9Y2R0 106 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC9-215ENST00000524162 A0A096LNT2 108 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 RNF223E7ERA6 249 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 J3QW42 95 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 SCG5P05408 212 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 IGFBP1P08833 259 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 PDLIM4P50479 330 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 GLO1Q04760 184 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 LOXL1Q08397 574 aaPredicted RBP17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 LEG1Q6P5S2 330 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 ZNF540Q8NDQ6 660 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 NMNAT3Q96T66 252 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 DDOQ99489 341 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 CADM1Q9BY67 442 aaKnown RBP17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 ELOVL3Q9HB03 270 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 DYNLRB1Q9NP97 96 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 VNN3Q9NY84 501 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 B9D1Q9UPM9 204 aa17.94■□□□□ 0.46
TRAPPC9-215ENST00000524162 IGHV4-30-2A0A087WSY4 118 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 VWC2LB2RUY7 222 aa17.93■□□□□ 0.46
TRAPPC9-215ENST00000524162 SGCEO43556 437 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms