RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 PLA2G7Q13093 441 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 MPP2Q14168 576 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 GK3PQ14409 553 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 PRSS53Q2L4Q9 553 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 ANKRD55Q3KP44 614 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 AGBL4Q5VU57 503 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 TMEM42Q69YG0 159 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 BICRALQ6AI39 1079 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 TBC1D3CQ6IPX1 549 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 C22orf39Q6P5X5 142 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 DRAM2Q6UX65 266 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 Q6ZVU0 165 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 SLC36A1Q7Z2H8 476 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 LDLRAD3Q86YD5 345 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 TBC1D3Q8IZP1 549 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-216ENST00000523088 OR4P4Q8NGL7 312 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 ADAMTS17Q8TE56 1095 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 CCDC107Q8WV48 283 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 EMG1Q92979 244 aaKnown RBP6.81□□□□□ -1.32
HDAC3-216ENST00000523088 MYEOVQ96EZ4 313 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 SLC6A18Q96N87 628 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 OR2A14Q96R47 310 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 OR7D2Q96RA2 312 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 SLC29A3Q9BZD2 475 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 STRADBQ9C0K7 418 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 LHPPQ9H008 270 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 TLNRD1Q9H1K6 362 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 ZNF552Q9H707 407 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-216ENST00000523088 BEX1Q9HBH7 125 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 RAB9BQ9NP90 201 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 KCNK9Q9NPC2 374 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 FSCN3Q9NQT6 498 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 IL36AQ9UHA7 158 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 SNX11Q9Y5W9 270 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 DOCK9Q9BZ29 2069 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 ARID1BQ8NFD5 2236 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-216ENST00000523088 IGF2RP11717 2491 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 PLXNB3Q9ULL4 1909 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 TRAV30A0A087WSZ9 112 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 hCG_38984A0A1B0GV85 526 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SMCO3A2RU48 225 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 GFYI3L273 518 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 FGF10O15520 208 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 RAMP2O60895 175 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 ICOSLGO75144 302 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 ARG1P05089 322 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 HKR1P10072 659 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 UNGP13051 313 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 GLB1P16278 677 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SDC1P18827 310 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 RAB6AP20340 208 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 FPR1P21462 350 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 ZBTB25P24278 435 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 ITGB7P26010 798 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SOX2P48431 317 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 NXPH1P58417 271 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SNRPD1P62314 119 aaKnown RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 TBPL1P62380 186 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 RANP62826 216 aaKnown RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 RPS21P63220 83 aaKnown RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 EFNB1P98172 346 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SCAPQ12770 1279 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 NFATC2Q13469 925 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 FGFBP1Q14512 234 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 EXT1Q16394 746 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SYTL3Q4VX76 610 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 ARL13AQ5H913 290 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 CTSL3PQ5NE16 218 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 AWAT2Q6E213 333 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 OR2A2Q6IF42 318 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 CCDC144NLQ6NUI1 221 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 DNAJC24Q6P3W2 148 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 HACD2Q6Y1H2 254 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SSX6Q7RTT6 188 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 NUFIP2Q7Z417 695 aaKnown RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 NRARPQ7Z6K4 114 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 TMPRSS12Q86WS5 348 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 ZNF683Q8IZ20 524 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 GABRG1Q8N1C3 465 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 LYG1Q8N1E2 194 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 C2orf73Q8N5S3 287 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 FBXO36Q8NEA4 188 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 DUSP18Q8NEJ0 188 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 OR10G3Q8NGC4 313 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 OR2A12Q8NGT7 310 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 OR2I1PQ8NGU4 316 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 THAP6Q8TBB0 222 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 RNASEH2CQ8TDP1 164 aaKnown RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 CASTOR1Q8WTX7 329 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 CNOT9Q92600 299 aaKnown RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 DAZLQ92904 295 aaKnown RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 TOMM40LQ969M1 308 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 PIGTQ969N2 578 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 TMEM159Q96B96 161 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 IL4I1Q96RQ9 567 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 S100A13Q99584 98 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 SLC6A7Q99884 636 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 TIMM29Q9BSF4 260 aa6.8□□□□□ -1.32
HDAC3-216ENST00000523088 DPCDQ9BVM2 203 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-216ENST00000523088 TMEM121BQ9BXQ6 578 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms