RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 C11orf40Q8WZ69 217 aa9.36□□□□□ -0.91
PVT1-216ENST00000523068 HDAC2Q92769 488 aaKnown RBP9.36□□□□□ -0.91
PVT1-216ENST00000523068 HPS1Q92902 700 aa9.36□□□□□ -0.91
PVT1-216ENST00000523068 SLCO4A1Q96BD0 722 aa9.36□□□□□ -0.91
PVT1-216ENST00000523068 MSI2Q96DH6 328 aaKnown RBP9.36□□□□□ -0.91
PVT1-216ENST00000523068 CENPNQ96H22 339 aaPredicted RBP9.36□□□□□ -0.91
PVT1-216ENST00000523068 PKP2Q99959 881 aa9.36□□□□□ -0.91
PVT1-216ENST00000523068 ANKRD19PQ9H560 264 aa9.36□□□□□ -0.91
PVT1-216ENST00000523068 C8orf4Q9NR00 106 aa9.36□□□□□ -0.91
PVT1-216ENST00000523068 MAN2C1Q9NTJ4 1040 aa9.36□□□□□ -0.91
PVT1-216ENST00000523068 SLCO1C1Q9NYB5 712 aa9.36□□□□□ -0.91
PVT1-216ENST00000523068 TMEM5Q9Y2B1 443 aa9.36□□□□□ -0.91
PVT1-216ENST00000523068 CUBNO60494 3623 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 A0A087WUU8 490 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 J3KTA2 159 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 FFAR1O14842 300 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 CST1P01037 141 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 MMP7P09237 267 aaPredicted RBP9.35□□□□□ -0.91
PVT1-216ENST00000523068 CCL2P13500 99 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 ZNF250P15622 560 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 ITGA2P17301 1181 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 MAKP20794 623 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 HNF1AP20823 631 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 ACHEP22303 614 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 STOMP27105 288 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 APEX1P27695 318 aaKnown RBP9.35□□□□□ -0.91
PVT1-216ENST00000523068 PEX2P28328 305 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 ALDH3B1P43353 468 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 PCBD1P61457 104 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 MRPS11P82912 194 aaKnown RBP9.35□□□□□ -0.91
PVT1-216ENST00000523068 FMODQ06828 376 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 RIN1Q13671 783 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 SGCAQ16586 387 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 NKPD1Q17RQ9 610 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 PABPC1L2AQ5JQF8 200 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 OGFRL1Q5TC84 451 aaPredicted RBP9.35□□□□□ -0.91
PVT1-216ENST00000523068 FAM27BQ5VT28 67 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 SLC25A47Q6Q0C1 308 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 TMPRSS11FQ6ZWK6 438 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 CXXC5Q7LFL8 322 aaKnown RBP9.35□□□□□ -0.91
PVT1-216ENST00000523068 LRP11Q86VZ4 500 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 ZDHHC21Q8IVQ6 265 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 PAQR4Q8N4S7 273 aaPredicted RBP9.35□□□□□ -0.91
PVT1-216ENST00000523068 OR51A7Q8NH64 312 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 SNX33Q8WV41 574 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 NSMAFQ92636 917 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 RDH5Q92781 318 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 NABP1Q96AH0 204 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 NMD3Q96D46 503 aaKnown RBP9.35□□□□□ -0.91
PVT1-216ENST00000523068 MDFIQ99750 246 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 C9orf16Q9BUW7 83 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 SEMA6AQ9H2E6 1030 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 CHODLQ9H9P2 273 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 NMNAT1Q9HAN9 279 aaPredicted RBP9.35□□□□□ -0.91
PVT1-216ENST00000523068 TAAR3PQ9P1P4 343 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 EIF3KQ9UBQ5 218 aaKnown RBP9.35□□□□□ -0.91
PVT1-216ENST00000523068 FZR1Q9UM11 496 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 FAM32AQ9Y421 112 aaKnown RBP9.35□□□□□ -0.91
PVT1-216ENST00000523068 UGT2A1Q9Y4X1 527 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 ENPP4Q9Y6X5 453 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 RTTNQ86VV8 2226 aa9.35□□□□□ -0.91
PVT1-216ENST00000523068 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.34□□□□□ -0.913e-11■■□□□ 11.9
PVT1-216ENST00000523068 IGLV3-9A0A075B6K5 115 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 TRAV27A0A087WT01 109 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 XKRYO14609 159 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 AHCYL1O43865 530 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 LILRA1O75019 489 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 E2F6O75461 281 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 PRSS23O95084 383 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 TGFAP01135 160 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 HPXP02790 462 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 MT-ND5P03915 603 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 CST2P09228 141 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 NAT2P11245 290 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 ZNF32P17041 273 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 CCNOP22674 350 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 CDAP32320 146 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 RPL4P36578 427 aaKnown RBP9.34□□□□□ -0.91
PVT1-216ENST00000523068 GPR4P46093 362 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 HSPA13P48723 471 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 GDI2P50395 445 aaKnown RBP9.34□□□□□ -0.91
PVT1-216ENST00000523068 ARHGDIAP52565 204 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 TMEM33P57088 247 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 MAD2L1BPQ15013 274 aaPredicted RBP9.34□□□□□ -0.91
PVT1-216ENST00000523068 LRRC36Q1X8D7 754 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 PCGF3Q3KNV8 242 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 ZBED5Q49AG3 693 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 LPCAT4Q643R3 524 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 TMEM154Q6P9G4 183 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 IZUMO2Q6UXV1 221 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 AMIGO2Q86SJ2 522 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 IGFN1Q86VF2 1251 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 ARIH2OSQ8N7S6 290 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 LRRC75AQ8NAA5 344 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 OR1J1Q8NGS3 322 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 OR13C2Q8NGS9 318 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 SPATA3Q8NHX4 192 aa9.34□□□□□ -0.91
PVT1-216ENST00000523068 TSPAN32Q96QS1 320 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms