RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 MAGEB1P43366 347 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 EVX1P49640 407 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 SLC7A2P52569 658 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 PRKAG1P54619 331 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 CSNK2A1P68400 391 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 LCN2P80188 198 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 MRPS11P82912 194 aaKnown RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 TXNL4AP83876 142 aaKnown RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 TGFBR3Q03167 851 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 HSPB3Q12988 150 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 SNTB2Q13425 540 aaKnown RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 GALEQ14376 348 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 KPNB1Q14974 876 aaKnown RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 CNN3Q15417 329 aaKnown RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 FAM189A2Q15884 450 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 TMEM95Q3KNT9 176 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 OR4F3Q6IEY1 312 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 LCN8Q6JVE9 175 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 KRT80Q6KB66 452 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 ZFP1Q6P2D0 407 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 SLC2A7Q6PXP3 512 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 KLHL24Q6TFL4 600 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 DHDDSQ86SQ9 333 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 SERPINA11Q86U17 422 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 WDFY1Q8IWB7 410 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 CDRT4Q8N9R6 151 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 PAPD5Q8NDF8 572 aaKnown RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 OR7A2PQ8NGA2 310 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 OR5W2Q8NH69 310 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 MRAPQ8TCY5 172 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 OR5P2Q8WZ92 322 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 TRIM63Q969Q1 353 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 RAB24Q969Q5 203 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 TMEM45BQ96B21 275 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 KTI12Q96EK9 354 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 CLPTM1LQ96KA5 538 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF385AQ96PM9 386 aaKnown RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 GPA33Q99795 319 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 ZNF416Q9BWM5 594 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 OR11A1Q9GZK7 315 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 C1RLQ9NZP8 487 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 STX18Q9P2W9 335 aaKnown RBP5.58□□□□□ -1.52
SDCBP-210ENST00000522843 KCNE5Q9UJ90 142 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 KCNE3Q9Y6H6 103 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 RYR1P21817 5038 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 LYSTQ99698 3801 aa5.58□□□□□ -1.52
SDCBP-210ENST00000522843 A0A1B0GUS0 222 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CLPSL1A2RUU4 121 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 TRAPPC2LH3BP13 241 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 M0R233 179 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CLIC1O00299 241 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 TRAF3IP2O43734 574 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-210ENST00000522843 ENTPD5O75356 428 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 NDUFA7O95182 113 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 NGFP01138 241 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 IGHV4-38-2P0DP08 117 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CBR1P16152 277 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 UQCRC2P22695 453 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 GATA3P23771 443 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 GSK3BP49841 420 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 MVDP53602 400 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 LOXL3P58215 753 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 PROK1P58294 105 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 LIPEQ05469 1076 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 MERTKQ12866 999 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 FADDQ13158 208 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 SKP2Q13309 424 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 DAG1Q14118 895 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 TAF9Q16594 264 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 MTX3Q5HYI7 312 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 C6orf10Q5SRN2 563 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 C1orf146Q5VVC0 180 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 ANKRD26P1Q6NSI1 321 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CDC73Q6P1J9 531 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 COX18Q8N8Q8 333 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CLHC1Q8NHS4 586 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 MAGEE2Q8TD90 523 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CDS1Q92903 461 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CIDECQ96AQ7 238 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-210ENST00000522843 PPCDCQ96CD2 204 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 AURKBQ96GD4 344 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-210ENST00000522843 THUMPD3Q9BV44 507 aaKnown RBP5.57□□□□□ -1.52
SDCBP-210ENST00000522843 TPT1P8Q9HAU6 139 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 RNPEPL1Q9HAU8 725 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 BEX1Q9HBH7 125 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 S100A14Q9HCY8 104 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CTPS2Q9NRF8 586 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 SLC6A13Q9NSD5 602 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 ACER3Q9NUN7 267 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 ARMC1Q9NVT9 282 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 ADA2Q9NZK5 511 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 SH3BP4Q9P0V3 963 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CORO2BQ9UQ03 480 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 SLC9A8Q9Y2E8 581 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CMAHPQ9Y471 501 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 WIPI2Q9Y4P8 454 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 CACNG2Q9Y698 323 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 DNAH7Q8WXX0 4024 aa5.57□□□□□ -1.52
SDCBP-210ENST00000522843 PPIAL4EA0A075B759 164 aa5.56□□□□□ -1.52
SDCBP-210ENST00000522843 IGHV3OR16-10A0A075B7F0 116 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms