RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 TMA16Q96EY4 203 aaKnown RBP3.1□□□□□ -1.91
SKP1-208ENST00000521216 ZBTB18Q99592 522 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 CIB1Q99828 191 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 YIPF3Q9GZM5 350 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 NDEL1Q9GZM8 345 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 LRRC19Q9H756 370 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 FN3KRPQ9HA64 309 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 FANCEQ9HB96 536 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 LHX9Q9NQ69 397 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 EURLQ9NYK6 297 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 HMGXB4Q9UGU5 601 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 SLC7A8Q9UHI5 535 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 C15orf41Q9Y2V0 281 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 CBY1Q9Y3M2 126 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 CDHR2Q9BYE9 1310 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 KIF27Q86VH2 1401 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 SETD5Q9C0A6 1442 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 CNTLNQ9NXG0 1405 aa3.1□□□□□ -1.91
SKP1-208ENST00000521216 NCOA2Q15596 1464 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 ABCA10Q8WWZ4 1543 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 PPIAL4EA0A075B759 164 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 C1orf232A0A0U1RR37 186 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 PLAC8L1A1L4L8 177 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 GOLGA8IPA6NC78 632 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 ERVV-1B6SEH8 477 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 PSTPIP1O43586 416 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 NIPSNAP2O75323 286 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 CRTAPO75718 401 aaPredicted RBP3.09□□□□□ -1.91
SKP1-208ENST00000521216 RPS17P08708 135 aaKnown RBP3.09□□□□□ -1.91
SKP1-208ENST00000521216 ZDHHC11BP0C7U3 371 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 PPIAL4FP0DN26 164 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 SYT1P21579 422 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 AK4P27144 223 aaPredicted RBP3.09□□□□□ -1.91
SKP1-208ENST00000521216 RORCP51449 518 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 NCBP2P52298 156 aaKnown RBP eCLIP3.09□□□□□ -1.91
SKP1-208ENST00000521216 UBE2IP63279 158 aaKnown RBP3.09□□□□□ -1.91
SKP1-208ENST00000521216 CCNA1P78396 465 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 SPAG1Q07617 926 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 ARHGAP19Q14CB8 494 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 TSC22D1Q15714 1073 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 KCTD21Q4G0X4 260 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 CEP55Q53EZ4 464 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 CCNJQ5T5M9 372 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 AKAP14Q86UN6 197 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 COMTD1Q86VU5 262 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 ST13P4Q8IZP2 240 aaPredicted RBP3.09□□□□□ -1.91
SKP1-208ENST00000521216 ZNF565Q8N9K5 539 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 SHC3Q92529 594 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 CIDECQ96AQ7 238 aaPredicted RBP3.09□□□□□ -1.91
SKP1-208ENST00000521216 C19orf60Q96EN9 201 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 TSSK3Q96PN8 268 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 NPY6RQ99463 290 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 GCOM2Q9BZD3 368 aaPredicted RBP3.09□□□□□ -1.91
SKP1-208ENST00000521216 CRLF2Q9HC73 371 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 INPP5EQ9NRR6 644 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 DDX18Q9NVP1 670 aaKnown RBP3.09□□□□□ -1.91
SKP1-208ENST00000521216 ZNF639Q9UID6 485 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 COMMD3-BMI1R4GMX3 469 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 UBN2Q6ZU65 1347 aa3.09□□□□□ -1.91
SKP1-208ENST00000521216 SBNO1A3KN83 1393 aa3.09□□□□□ -1.92
SKP1-208ENST00000521216 RTL1A6NKG5 1358 aa3.09□□□□□ -1.92
SKP1-208ENST00000521216 CLIP1P30622 1438 aa3.09□□□□□ -1.92
SKP1-208ENST00000521216 ABCA5Q8WWZ7 1642 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 IGLV4-60A0A075B6I1 120 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 PVALEFA0A1B0GWK0 134 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 ARHGEF35A5YM69 484 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 LRRIQ4A6NIV6 560 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 OR52A4PA6NMU1 304 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 TMEM114B3SHH9 223 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 NDUFS8O00217 210 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 GOSR2O14653 212 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 PPP1R2P9O14990 202 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 ENTPD5O75356 428 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 C1orf105O95561 183 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 C2P06681 752 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 PRKACAP17612 351 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 ATF6P18850 670 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 YAP1P46937 504 aaKnown RBP3.08□□□□□ -1.92
SKP1-208ENST00000521216 GDI2P50395 445 aaKnown RBP3.08□□□□□ -1.92
SKP1-208ENST00000521216 TPMTP51580 245 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 UGT2B15P54855 530 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 HADHBP55084 474 aaKnown RBP3.08□□□□□ -1.92
SKP1-208ENST00000521216 KRTAP10-8P60410 259 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 ACTA2P62736 377 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 ACTC1P68032 377 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 KDSRQ06136 332 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 EIF4EBP1Q13541 118 aaPredicted RBP3.08□□□□□ -1.92
SKP1-208ENST00000521216 GK3PQ14409 553 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 PRPSAP1Q14558 356 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 NCF4Q15080 339 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 ALX1Q15699 326 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 ZNF77Q15935 545 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 LINC00483Q53H64 154 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 PHYHD1Q5SRE7 291 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 FAM71E1Q6IPT2 247 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 LYPD2Q6UXB3 125 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 USP50Q70EL3 339 aaPredicted RBP3.08□□□□□ -1.92
SKP1-208ENST00000521216 STRADAQ7RTN6 431 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 LHFPL3Q86UP9 236 aa3.08□□□□□ -1.92
SKP1-208ENST00000521216 ERO1BQ86YB8 467 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms