RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ACBD4Q8NC06 268 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 OR8H1Q8NGG4 311 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 RGP1Q92546 391 aaPredicted RBP10.18□□□□□ -0.78
CLK4-206ENST00000520878 FAM3DQ96BQ1 224 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 MRGPRX4Q96LA9 322 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 S100A13Q99584 98 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 GINS4Q9BRT9 223 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 PRRG4Q9BZD6 226 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 C1orf198Q9H425 327 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 EXO5Q9H790 373 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 MRPL22Q9NWU5 206 aaKnown RBP10.18□□□□□ -0.78
CLK4-206ENST00000520878 ALKBH4Q9NXW9 302 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 B3GALT5Q9Y2C3 310 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 LOXL2Q9Y4K0 774 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 YKT6O15498 198 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 PLATP00750 562 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 CCL3P10147 92 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 ITGA3P26006 1051 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 MSX1P28360 303 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 DCTDP32321 178 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 FAUP35544 74 aaKnown RBP10.18□□□□□ -0.78
CLK4-206ENST00000520878 PTH2RP49190 550 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 PLCZ1Q86YW0 608 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 TNFAIP8L1Q8WVP5 186 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 SLAMF6Q96DU3 332 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 SFXN2Q96NB2 322 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 TGIF2Q9GZN2 237 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 OR51J1Q9H342 316 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 EIF3KQ9UBQ5 218 aaKnown RBP10.18□□□□□ -0.78
CLK4-206ENST00000520878 A0A0G2JK05 382 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 DXOO77932 396 aaKnown RBP10.17□□□□□ -0.78
CLK4-206ENST00000520878 KDM4BO94953 1096 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 THBS2P35442 1172 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 VEGFCP49767 419 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 RRAS2P62070 204 aaPredicted RBP10.17□□□□□ -0.78
CLK4-206ENST00000520878 CHAF1BQ13112 559 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 NKPD1Q17RQ9 610 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 PRSS35Q8N3Z0 413 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 NFAM1Q8NET5 270 aaPredicted RBP10.17□□□□□ -0.78
CLK4-206ENST00000520878 GIMAP1Q8WWP7 306 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 PHYHIPQ92561 330 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 YIPF5Q969M3 257 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 TMEM41AQ96HV5 264 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 CITED4Q96RK1 184 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 UBL7Q96S82 380 aaPredicted RBP10.17□□□□□ -0.78
CLK4-206ENST00000520878 A0A0A6YYJ9 748 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 MS4A18H0YCH9 400 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 GPR171O14626 319 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 HLA-DMAP28067 261 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 CSNK1A1P48729 337 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 STARP49675 285 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 GUCA2AQ02747 115 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 MS4A18Q3C1V0 323 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 C2orf76Q3KRA6 126 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 C4orf46Q504U0 113 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 LINC00696Q6ZRV3 163 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 FAM57BQ71RH2 274 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 DND1Q8IYX4 353 aaKnown RBP10.17□□□□□ -0.78
CLK4-206ENST00000520878 ASCC1Q8N9N2 400 aaKnown RBP10.17□□□□□ -0.78
CLK4-206ENST00000520878 OR5D18Q8NGL1 313 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 PGAM5Q96HS1 289 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 ST6GAL2Q96JF0 529 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 MNTQ99583 582 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 OR2B2Q9GZK3 357 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 DNAJC13O75165 2243 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 IGKV1D-43A0A0B4J1Z2 117 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 LIPT2A6NK58 231 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 IGHV3-9P01782 118 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 LIPCP11150 499 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 PNLIPP16233 465 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 CCNOP22674 350 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 PRSS3P35030 304 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 SIGLEC14Q08ET2 396 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 C9orf135Q5VTT2 229 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 ZNF704Q6ZNC4 412 aaPredicted RBP10.17□□□□□ -0.78
CLK4-206ENST00000520878 WDR5BQ86VZ2 330 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 EGFL6Q8IUX8 553 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 OR51A2Q8NGJ7 313 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 DDOQ99489 341 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 STEAP1Q9UHE8 339 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 FRYLO94915 3013 aa10.17□□□□□ -0.78
CLK4-206ENST00000520878 UBE2QL1A1L167 161 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 ACOT7O00154 380 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 TXNDC12O95881 172 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 HTR2CP28335 458 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 KIR3DL2P43630 455 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 CLDN20P56880 219 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 TAS2R20P59543 309 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 CCDC92Q53HC0 331 aaPredicted RBP10.16□□□□□ -0.78
CLK4-206ENST00000520878 TMEM244Q5VVB8 128 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 OR51E1Q8TCB6 317 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 CREB3L1Q96BA8 519 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 RER1O15258 196 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 FABP7O15540 132 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 RAMP1O60894 148 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 WNT11O96014 354 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 RAB40ALP0C0E4 278 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 ADRA2CP18825 462 aa10.16□□□□□ -0.78
CLK4-206ENST00000520878 PTBP1P26599 531 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLK4-206ENST00000520878 TMEM53Q6P2H8 277 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms