RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 NOX1Q9Y5S8 564 aa6.97□□□□□ -1.29
CTHRC1-203ENST00000520337 LIPGQ9Y5X9 500 aa6.97□□□□□ -1.29
CTHRC1-203ENST00000520337 CFAP47Q6ZTR5 3102 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 IGLV1-36A0A0B4J1U3 117 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 IGHV3-15A0A0B4J1V0 119 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SLC22A23A1A5C7 686 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 A6NIZ1 184 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 FAM171A2A8MVW0 826 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 NPIPA5E9PKD4 350 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 ACOT7O00154 380 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SMAD9O15198 467 aaKnown RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 CXCL13O43927 109 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 GLCEO94923 617 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 ACTL6AO96019 429 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 RENP00797 406 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 IGHG3P01860 377 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SBK2P0C263 348 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 ZNF708P17019 499 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 CD40LGP29965 261 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 PYCR1P32322 319 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 UGT2B10P36537 528 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 DAP3P51398 398 aaKnown RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 BIDP55957 195 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 RAP1BP61224 184 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 RAP1AP62834 184 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 POU3F1Q03052 451 aaPredicted RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 MELKQ14680 651 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SLC17A1Q14916 467 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 ZNF169Q14929 603 aaPredicted RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 PON3Q15166 354 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 CCDC92Q53HC0 331 aaPredicted RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SLC35D3Q5M8T2 416 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 FAM205BPQ63HN1 556 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 VASNQ6EMK4 673 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 TMEM225Q6GV28 225 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 CREB3L2Q70SY1 520 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 ZBTB46Q86UZ6 589 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SIAH3Q8IW03 269 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 UEVLDQ8IX04 471 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 UBQLNLQ8IYU4 475 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 OR6X1Q8NH79 312 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 C9orf43Q8TAL5 461 aaPredicted RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 NEIL3Q8TAT5 605 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SMAP2Q8WU79 429 aaPredicted RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 FCGR1BQ92637 280 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 RORBQ92753 470 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 FAM122AQ96E09 287 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 ZMYND19Q96E35 227 aaPredicted RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 ZNF845Q96IR2 970 aaPredicted RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 OR5M11Q96RB7 305 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 TAAR6Q96RI8 345 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 NAA11Q9BSU3 229 aaPredicted RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 ALG12Q9BV10 488 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 EMC6Q9BV81 110 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 NUAK2Q9H093 628 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SYT4Q9H2B2 425 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SP140LQ9H930 580 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 MED29Q9NX70 200 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 SPRR3Q9UBC9 169 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 DAPK2Q9UIK4 370 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 NPIPA1Q9UND3 350 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 B9D1Q9UPM9 204 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 UGT2A1Q9Y4X1 527 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 FKBP7Q9Y680 259 aa6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 INTS1Q8N201 2190 aaKnown RBP6.96□□□□□ -1.3
CTHRC1-203ENST00000520337 MAP1BP46821 2468 aaKnown RBP6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 A0A087WV48 116 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 TRGV5A0A0B4J1U4 118 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 A0A1B0GVC2 190 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 ZNF716A6NP11 495 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 BOLA2-SMG1P6H3BVE0 249 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 XKRYO14609 159 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 VAMP5O95183 116 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 GPANK1O95872 356 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 TFP02787 698 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 MRPL3P09001 348 aaKnown RBP6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 PGA4P0DJD7 388 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 PGA3P0DJD8 388 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 CPN1P15169 458 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 CTLA4P16410 223 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 PTGS2P35354 604 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 CD79BP40259 229 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 HCCSP53701 268 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 SLC16A1P53985 500 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 TMPRSS3P57727 454 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 RPS7P62081 194 aaKnown RBP6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 LGALS3BPQ08380 585 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 C1DQ13901 141 aaKnown RBP6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 SPCS2Q15005 226 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 ETFDHQ16134 617 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 CTF1Q16619 201 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 HIST3H3Q16695 136 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 NDUFA5Q16718 116 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 ABLIM2Q6H8Q1 611 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 SLC16A12Q6ZSM3 486 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 GPAT4Q86UL3 456 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 LHFPL3Q86UP9 236 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 TIGD4Q8IY51 512 aa6.95□□□□□ -1.3
CTHRC1-203ENST00000520337 ACBD7Q8N6N7 88 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms