RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 KRBOX4Q5JUW0 171 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 C3orf33Q6P1S2 294 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 OPN5Q6U736 354 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 RNF165Q6ZSG1 346 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 H1FNTQ75WM6 255 aaPredicted RBP10.65□□□□□ -0.7
SYNPO-204ENST00000519664 ZAR1Q86SH2 424 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 SULF2Q8IWU5 870 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 OR2L13Q8N349 312 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 NINJ1Q92982 152 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 C10orf90Q96M02 699 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 DNTTIP1Q9H147 329 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 RGCCQ9H4X1 137 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 CHRNA9Q9UGM1 479 aa10.65□□□□□ -0.7
SYNPO-204ENST00000519664 C2CD4DB7Z1M9 353 aa10.65□□□□□ -0.71
SYNPO-204ENST00000519664 TUBG1P23258 451 aa10.65□□□□□ -0.71
SYNPO-204ENST00000519664 ETV6P41212 452 aa10.65□□□□□ -0.71
SYNPO-204ENST00000519664 HTR5AP47898 357 aa10.65□□□□□ -0.71
SYNPO-204ENST00000519664 AKR1C1Q04828 323 aa10.65□□□□□ -0.71
SYNPO-204ENST00000519664 HACD4Q5VWC8 232 aa10.65□□□□□ -0.71
SYNPO-204ENST00000519664 MRPL21Q7Z2W9 205 aaKnown RBP10.65□□□□□ -0.71
SYNPO-204ENST00000519664 LHFPL5Q8TAF8 219 aa10.65□□□□□ -0.71
SYNPO-204ENST00000519664 RADILQ96JH8 1075 aa10.65□□□□□ -0.71
SYNPO-204ENST00000519664 MMACHCQ9Y4U1 282 aa10.65□□□□□ -0.71
SYNPO-204ENST00000519664 LOC107986453A0A1B0GWG9 222 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 CDK2AP1O14519 115 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 ALOX12BO75342 701 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 MVDP53602 400 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 RHEBQ15382 184 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 ZNF425Q6IV72 752 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 SSX9Q7RTT3 188 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 PELI1Q96FA3 418 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 ARHGDIGQ99819 225 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 LRRC61Q9BV99 259 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 HINT2Q9BX68 163 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 IGHV3-64DA0A0J9YX35 117 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 GABARAPH6UMI1 98 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 HRKO00198 91 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 DNAJB6O75190 326 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 POU3F2P20265 443 aaPredicted RBP10.64□□□□□ -0.71
SYNPO-204ENST00000519664 BTG1P62324 171 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 PMPCAQ10713 525 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 MFAP5Q13361 173 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 MEF2DQ14814 521 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 STAC2Q6ZMT1 411 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 LINC00696Q6ZRV3 163 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 CMIPQ8IY22 773 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 FAM71CQ8NEG0 241 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 OR5T1Q8NG75 326 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 OR52B4Q8NGK2 314 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 FNDC9Q8TBE3 224 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 OR51E1Q8TCB6 317 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 HLA-CQ95604 372 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 SIGLEC11Q96RL6 698 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 OR10A2Q9H208 303 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 SLCO1C1Q9NYB5 712 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 PLXNB2O15031 1838 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 CENPVL1A0A0U1RR11 272 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 EDN3P14138 238 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 OMGP23515 440 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 GABREP78334 506 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 CYCSP99999 105 aaKnown RBP10.64□□□□□ -0.71
SYNPO-204ENST00000519664 GUCA2AQ02747 115 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 PAN3Q58A45 887 aaKnown RBP10.64□□□□□ -0.71
SYNPO-204ENST00000519664 GPR157Q5UAW9 335 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 GLIPR1L1Q6UWM5 242 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 ZNF679Q8IYX0 411 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 BHLHE23Q8NDY6 225 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 NUDCD2Q8WVJ2 157 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 NAT6Q93015 286 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 CCDC74AQ96AQ1 378 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 LURAP1Q96LR2 239 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 DCBLD2Q96PD2 775 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 DUSP23Q9BVJ7 150 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 CTSFQ9UBX1 484 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 POMT2Q9UKY4 750 aa10.64□□□□□ -0.71
SYNPO-204ENST00000519664 IGHV5-51A0A0C4DH38 117 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 LOC100289279A0A1B0GTE1 492 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 OR6C68A6NDL8 312 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 BET1O15155 118 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 OIP5O43482 229 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 TSPAN15O95858 294 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 CD3DP04234 171 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 SLC35D3Q5M8T2 416 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 AVPI1Q5T686 147 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 MOB3CQ70IA8 216 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 SLC16A14Q7RTX9 510 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 LIX1LQ8IVB5 337 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 OR1J4Q8NGS1 313 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 OR2G2Q8NGZ5 317 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 CNTNAP3BQ96NU0 1288 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 SYT3Q9BQG1 590 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 UFSP2Q9NUQ7 469 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 SLC5A6Q9Y289 635 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 A0A1W2PPV9 198 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 GCM2O75603 506 aaPredicted RBP10.63□□□□□ -0.71
SYNPO-204ENST00000519664 ZFPL1O95159 310 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 ZNF44P15621 663 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 P2RX1P51575 399 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 TRIM61Q5EBN2 209 aa10.63□□□□□ -0.71
SYNPO-204ENST00000519664 LANCL3Q6ZV70 420 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms