RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 BCL2A1Q16548 175 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 PRSS33Q8NF86 280 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 SETD6Q8TBK2 473 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 GPR148Q8TDV2 347 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 KCNE4Q8WWG9 221 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 UCN2Q96RP3 112 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 GFI1Q99684 422 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 NAA11Q9BSU3 229 aaPredicted RBP13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 ZFP64Q9NPA5 681 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 TRBV5-7A0A0A0MS05 114 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 IGHV3-15A0A0B4J1V0 119 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 GPR171O14626 319 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 PDCD5O14737 125 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 CCNKO75909 580 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 EIF4EP06730 217 aaKnown RBP13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 FREM3P0C091 2139 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 AGFG1P52594 562 aaKnown RBP13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 CLDN17P56750 224 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 MFGE8Q08431 387 aaPredicted RBP13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 MFAP5Q13361 173 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 RIN1Q13671 783 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 IL18Q14116 193 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 ODF4Q2M2E3 257 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 RSBN1Q5VWQ0 802 aaPredicted RBP13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 SLC25A47Q6Q0C1 308 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 MCHR2Q969V1 340 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 ABRACLQ9P1F3 81 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 EXTL2Q9UBQ6 330 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 SLC22A13Q9Y226 551 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 MRPS18CQ9Y3D5 142 aaKnown RBP13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 FREM2Q5SZK8 3169 aa13.74□□□□□ -0.21
THUMPD3-210ENST00000515662 A0A1W2PPL8 197 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 H0YC42 278 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 SRSF10O75494 262 aaKnown RBP13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 VAMP5O95183 116 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 NPR2P20594 1047 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 CASRP41180 1078 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 RFX2P48378 723 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 CLDN20P56880 219 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 CORO6Q6QEF8 472 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 CREB3L2Q70SY1 520 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 CATSPERDQ86XM0 798 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 OR10H5Q8NGA6 315 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 OR51A4Q8NGJ6 313 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 ADAMTS14Q8WXS8 1223 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 SIGLEC12Q96PQ1 595 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 UTP23Q9BRU9 249 aaKnown RBP13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 TP63Q9H3D4 680 aaPredicted RBP13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 ABI3Q9P2A4 366 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 CYB5R1Q9UHQ9 305 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 AHCTF1Q8WYP5 2266 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 MED12Q93074 2177 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 DOCK10Q96BY6 2186 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 A0A0B4J203 849 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 ANKRD61A6NGH8 418 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 TFECO14948 347 aaPredicted RBP13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 TRAPPC6AO75865 159 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 SNRPBP14678 240 aaKnown RBP13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 SCN1BQ07699 218 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 POU4F3Q15319 338 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 ZNF544Q6NX49 715 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 DEGS2Q6QHC5 323 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 GGNQ86UU5 652 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 UBE2J2Q8N2K1 259 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 OR4M1Q8NGD0 313 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 OR5H6Q8NGV6 325 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 PPP1R14AQ96A00 147 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 SRXN1Q9BYN0 137 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 OR2B2Q9GZK3 357 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 FBXL3Q9UKT7 428 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 R4GMQ9 66 aa13.73□□□□□ -0.21
THUMPD3-210ENST00000515662 DNPH1O43598 174 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 TLX3O43711 291 aaPredicted RBP13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 APOA1P02647 267 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 RAF1P04049 648 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 QDPRP09417 244 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 GDF1P27539 372 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 CD82P27701 267 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 WIPI1Q5MNZ9 446 aaPredicted RBP13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 AGAP6Q5VW22 663 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 LRFN4Q6PJG9 635 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 DTX1Q86Y01 620 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 Q8N402 240 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 ZNF433Q8N7K0 673 aaPredicted RBP13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 OR9K2Q8NGE7 335 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 RNF133Q8WVZ7 376 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 FER1L6-AS2Q96M78 137 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 DMRTB1Q96MA1 342 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 SFXN2Q96NB2 322 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 AGAP4Q96P64 663 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 FAM173AQ9BQD7 235 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 MMP28Q9H239 520 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 SEC61A2Q9H9S3 476 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 NEK6Q9HC98 313 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 TCF7L1Q9HCS4 588 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 BRD7Q9NPI1 651 aa13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 BOKQ9UMX3 212 aaPredicted RBP13.72□□□□□ -0.21
THUMPD3-210ENST00000515662 GTF2A1LQ9UNN4 478 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms