RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 AIREO43918 545 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 DIRAS1O95057 198 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 PTMAP06454 111 aaKnown RBP2.14□□□□□ -2.07
LINC01088-211ENST00000515597 RBMY1DP0C7P1 496 aaKnown RBP2.14□□□□□ -2.07
LINC01088-211ENST00000515597 RBMY1A1P0DJD3 496 aaKnown RBP2.14□□□□□ -2.07
LINC01088-211ENST00000515597 DESP17661 470 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 HNF1AP20823 631 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 PCMT1P22061 227 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 DDOSTP39656 456 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 RPS9P46781 194 aaKnown RBP2.14□□□□□ -2.07
LINC01088-211ENST00000515597 ERVK-25P63136 954 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 ELP6Q0PNE2 266 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 SMARCB1Q12824 385 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 MADCAM1Q13477 382 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 KRTAP21-3Q3LHN1 58 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 CARD16Q5EG05 197 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 COA6Q5JTJ3 125 aaKnown RBP2.14□□□□□ -2.07
LINC01088-211ENST00000515597 FAM71E1Q6IPT2 247 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 NLRP9Q7RTR0 991 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 ZNF546Q86UE3 836 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 TMEM123Q8N131 208 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 FAM133AQ8N9E0 248 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 OR4F15Q8NGB8 312 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 OR2L8Q8NGY9 312 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 ZNF596Q8TC21 504 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 TCEAL3Q969E4 200 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 UBE2E3Q969T4 207 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 CXorf40BQ96DE9 158 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 ASB9Q96DX5 294 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 TAAR1Q96RJ0 339 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 GBA3Q9H227 469 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 CDC42EP4Q9H3Q1 356 aaKnown RBP2.14□□□□□ -2.07
LINC01088-211ENST00000515597 TPK1Q9H3S4 243 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 RNF167Q9H6Y7 350 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 RMND5AQ9H871 391 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 TM9SF3Q9HD45 589 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 HOXC10Q9NYD6 342 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 CLCF1Q9UBD9 225 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 MEMO1Q9Y316 297 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 MYH3P11055 1940 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 PARP14Q460N5 1801 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 KIAA1671Q9BY89 1806 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 SCN10AQ9Y5Y9 1956 aa2.14□□□□□ -2.07
LINC01088-211ENST00000515597 SPTA1P02549 2419 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 PTPRQQ9UMZ3 2332 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 MYH13Q9UKX3 1938 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 UTP20O75691 2785 aaKnown RBP2.13□□□□□ -2.07
LINC01088-211ENST00000515597 NF1P21359 2839 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 IGLV11-55A0A075B6I3 123 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 A0A0G2JLM5 398 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 METTL21EPA6NDL7 271 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 HIDE1A8MVS5 230 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 H3BNH8 94 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 K7EQM0 130 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 PEX7O00628 323 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 ARPC3O15145 178 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 SS18L1O75177 396 aaPredicted RBP2.13□□□□□ -2.07
LINC01088-211ENST00000515597 RHOBTB1O94844 696 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 RDXP35241 583 aaKnown RBP2.13□□□□□ -2.07
LINC01088-211ENST00000515597 GSSP48637 474 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 SLAQ13239 276 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 DUSP7Q16829 419 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 TMEM183BQ1AE95 376 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 KLHL38Q2WGJ6 581 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 DMRTC1Q5HYR2 192 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 CES3Q6UWW8 571 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 H2AFVQ71UI9 128 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 PCP2Q8IVA1 136 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 TMEM183AQ8IXX5 376 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 TSNARE1Q96NA8 513 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 RBM14Q96PK6 669 aaKnown RBP2.13□□□□□ -2.07
LINC01088-211ENST00000515597 ZNF607Q96SK3 696 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 RIOK1Q9BRS2 568 aaKnown RBP2.13□□□□□ -2.07
LINC01088-211ENST00000515597 RAB33BQ9H082 229 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 MFSD1Q9H3U5 465 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 PRORYQ9H606 182 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 GIN1Q9NXP7 522 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 CTNNA3Q9UI47 895 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 POLDIP2Q9Y2S7 368 aa2.13□□□□□ -2.07
LINC01088-211ENST00000515597 SPENQ96T58 3664 aaKnown RBP2.13□□□□□ -2.07
LINC01088-211ENST00000515597 POLQO75417 2590 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 LAMA1P25391 3075 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 SPTAN1Q13813 2472 aaKnown RBP2.12□□□□□ -2.07
LINC01088-211ENST00000515597 CSMD1Q96PZ7 3565 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 DENND4AQ7Z401 1863 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 KIF26AQ9ULI4 1882 aaPredicted RBP2.12□□□□□ -2.07
LINC01088-211ENST00000515597 SDK1Q7Z5N4 2213 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 C12orf77C9JDV5 145 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 XKRYO14609 159 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 PRRG1O14668 218 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 PRKAB2O43741 272 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 SUPT3HO75486 399 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 RETP07949 1114 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 DBTP11182 482 aaKnown RBP2.12□□□□□ -2.07
LINC01088-211ENST00000515597 CXCL5P42830 114 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 SSR1P43307 286 aaKnown RBP2.12□□□□□ -2.07
LINC01088-211ENST00000515597 QARSP47897 775 aaKnown RBP2.12□□□□□ -2.07
LINC01088-211ENST00000515597 UBE2AP49459 152 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 CASP4P49662 377 aa2.12□□□□□ -2.07
LINC01088-211ENST00000515597 CRYBB1P53674 252 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms