RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 CACNA1DQ01668 2161 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 ABCA4P78363 2273 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 A0A1W2PPR1 153 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 FAM171A2A8MVW0 826 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 ATP6V1G2-DDX39BF2Z307 99 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 HS3ST1O14792 307 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 CASQ2O14958 399 aaPredicted RBP10.33□□□□□ -0.76
SNF8-215ENST00000515572 TMCC2O75069 709 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 GLCEO94923 617 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 PLAUP00749 431 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 TFP02787 698 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 CELA3BP08861 270 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 COX5BP10606 129 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 CLUP10909 449 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 ZNF823P16415 610 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 CDC42P60953 191 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 EFNB1P98172 346 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 PSG4Q00888 419 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 SLC34A1Q06495 639 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 RAB39AQ14964 217 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 TBC1D28Q2M2D7 210 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 ZNF672Q499Z4 452 aaPredicted RBP10.33□□□□□ -0.76
SNF8-215ENST00000515572 PABPC1L2AQ5JQF8 200 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 SLC35D3Q5M8T2 416 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 UGT2A3Q6UWM9 527 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 CXXC5Q7LFL8 322 aaKnown RBP10.33□□□□□ -0.76
SNF8-215ENST00000515572 ZNF584Q8IVC4 421 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 CPOQ8IVL8 374 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 SLC30A7Q8NEW0 376 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 GJC3Q8NFK1 279 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 KBTBD8Q8NFY9 601 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 OR4F15Q8NGB8 312 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 OR6K6Q8NGW6 343 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 AKAP1Q92667 903 aaKnown RBP eCLIP10.33□□□□□ -0.76
SNF8-215ENST00000515572 HRASLS5Q96KN8 279 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 CDADC1Q9BWV3 514 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 HCAR1Q9BXC0 346 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 TOR3AQ9H497 397 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 RNPEPL1Q9HAU8 725 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 HINT3Q9NQE9 182 aaKnown RBP10.33□□□□□ -0.76
SNF8-215ENST00000515572 ASH2LQ9UBL3 628 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 POU2F3Q9UKI9 436 aa10.33□□□□□ -0.76
SNF8-215ENST00000515572 HRNRQ86YZ3 2850 aaPredicted RBP10.32□□□□□ -0.76
SNF8-215ENST00000515572 CADP27708 2225 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 IGHV2OR16-5A0A0B4J2B6 119 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 SGCEO43556 437 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 PRKYO43930 277 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 SNAP29O95721 258 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 GPANK1O95872 356 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 GYPBP06028 91 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 ZNF35P13682 527 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 STOMP27105 288 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 PEX2P28328 305 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 APLNRP35414 380 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 GGT2P36268 569 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 ENTPD1P49961 510 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 CDH11P55287 796 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 KRTAP10-9P60411 292 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 ADAM8P78325 824 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 SPOCK1Q08629 439 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 MEP1BQ16820 701 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 LRRC36Q1X8D7 754 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 ZIK1Q3SY52 487 aaPredicted RBP10.32□□□□□ -0.76
SNF8-215ENST00000515572 TEX30Q5JUR7 227 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 LINC01590Q5TEZ4 76 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 LPCAT4Q643R3 524 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 C20orf204Q6ZNR8 217 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 MYPOPQ86VE0 399 aaPredicted RBP10.32□□□□□ -0.76
SNF8-215ENST00000515572 ZNF611Q8N823 705 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 TCEANCQ8N8B7 351 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 CPEB3Q8NE35 698 aaKnown RBP10.32□□□□□ -0.76
SNF8-215ENST00000515572 NUP37Q8NFH4 326 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 OR51L1Q8NGJ5 315 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 OR8J1Q8NGP2 316 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 OR2AJ1Q8NGZ0 328 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 LILRB1Q8NHL6 650 aaPredicted RBP10.32□□□□□ -0.76
SNF8-215ENST00000515572 TMEM163Q8TC26 289 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 TRUB1Q8WWH5 349 aaKnown RBP10.32□□□□□ -0.76
SNF8-215ENST00000515572 FBXW5Q969U6 566 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 MS4A3Q96HJ5 214 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 LURAP1Q96LR2 239 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 MBOAT4Q96T53 435 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 WNT5BQ9H1J7 359 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 OR51V1Q9H2C8 321 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 VCXQ9H320 206 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 MED20Q9H944 212 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 CDH20Q9HBT6 801 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 FAIMQ9NVQ4 179 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 MRPL22Q9NWU5 206 aaKnown RBP10.32□□□□□ -0.76
SNF8-215ENST00000515572 IMPAD1Q9NX62 359 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 SMPD3Q9NY59 655 aaPredicted RBP10.32□□□□□ -0.76
SNF8-215ENST00000515572 PLEK2Q9NYT0 353 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 CYB5R1Q9UHQ9 305 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 ATPIF1Q9UII2 106 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 NDRG4Q9ULP0 352 aaKnown RBP10.32□□□□□ -0.76
SNF8-215ENST00000515572 SPEF1Q9Y4P9 236 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 LHFPL6Q9Y693 200 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 ATP23Q9Y6H3 246 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 COMMD3-BMI1R4GMX3 469 aa10.32□□□□□ -0.76
SNF8-215ENST00000515572 TVP23AA6NH52 213 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms