RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 YIPF5Q969M3 257 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 C1orf159Q96HA4 380 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 FAM46AQ96IP4 442 aaKnown RBP11.68□□□□□ -0.54
TCOF1-215ENST00000515516 ZNF570Q96NI8 536 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 REPIN1Q9BWE0 567 aaKnown RBP11.68□□□□□ -0.54
TCOF1-215ENST00000515516 EGLN1Q9GZT9 426 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 WNT5BQ9H1J7 359 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 MYLK2Q9H1R3 596 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 CYSLTR2Q9NS75 346 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 ABCD2Q9UBJ2 740 aa11.68□□□□□ -0.54
TCOF1-215ENST00000515516 NDRG4Q9ULP0 352 aaKnown RBP11.68□□□□□ -0.54
TCOF1-215ENST00000515516 LOC100509620A0A075B734 347 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 IGHV1-69-2A0A0G2JMI3 117 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 A0A1W2PRQ8 180 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 H7C1C5 153 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 CDC42EP2O14613 210 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 SPRY3O43610 288 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 NCR1O76036 304 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 PRSS23O95084 383 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 NDUFB2O95178 105 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 ANPEPP15144 967 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 LIPAP38571 399 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 WNT5AP41221 380 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 SMIM11AP58511 58 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 PPP1CBP62140 327 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 LCN6P62502 163 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 SCRN3Q0VDG4 424 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 DGCR6Q14129 220 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 HFEQ30201 348 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 FAM209AQ5JX71 171 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 GPR139Q6DWJ6 353 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 ZNF774Q6NX45 483 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 FOXL2NBQ6ZUU3 175 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 PHC2Q8IXK0 858 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 SLC25A40Q8TBP6 338 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 SLC7A13Q8TCU3 470 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 TIMD4Q96H15 378 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 C4orf45Q96LM5 186 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 Q96M85 177 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 OR2J1Q9GZK6 312 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 RERGLQ9H628 205 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 SAP30LQ9HAJ7 183 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 POLE4Q9NR33 117 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 DCAF13Q9NV06 445 aaKnown RBP11.67□□□□□ -0.54
TCOF1-215ENST00000515516 TREM2Q9NZC2 230 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 NDUFAF4Q9P032 175 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 ADAM18Q9Y3Q7 739 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 GRIP1Q9Y3R0 1128 aa11.67□□□□□ -0.54
TCOF1-215ENST00000515516 TEX13CA0A0J9YWL9 993 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 PRSS37A4D1T9 235 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 CLDN25C9JDP6 229 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 H3BSA7 217 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 GSTM3P21266 225 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 CRYBB2P43320 205 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 FHL1Q13642 323 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 ZMAT1Q5H9K5 638 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 LIPNQ5VXI9 398 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 MBNL2Q5VZF2 373 aaKnown RBP11.66□□□□□ -0.54
TCOF1-215ENST00000515516 USP51Q70EK9 711 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 ZER1Q7Z7L7 766 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 ZNF101Q8IZC7 436 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 RNF148Q8N7C7 305 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 OR51F2Q8NH61 342 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 KLF14Q8TD94 323 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-215ENST00000515516 MCUR1Q96AQ8 359 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 ELMOD3Q96FG2 381 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 MARS2Q96GW9 593 aaKnown RBP11.66□□□□□ -0.54
TCOF1-215ENST00000515516 EMC7Q9NPA0 242 aa11.66□□□□□ -0.54
TCOF1-215ENST00000515516 CGGBP1Q9UFW8 167 aaPredicted RBP11.66□□□□□ -0.54
TCOF1-215ENST00000515516 UNC119BA6NIH7 251 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 SGCEO43556 437 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 TIMM8AO60220 97 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-215ENST00000515516 SNX3O60493 162 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 DOK2O60496 412 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 SLC16A7O60669 478 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 PTP4A3O75365 173 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 KHDRBS3O75525 346 aaKnown RBP11.65□□□□□ -0.54
TCOF1-215ENST00000515516 RP2O75695 350 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 ABHD16AO95870 558 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 MSMBP08118 114 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 GAAP10253 952 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 COX5BP10606 129 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 TUBG1P23258 451 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 SDHAP31040 664 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 MPV17P39210 176 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 HTR5AP47898 357 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 RPS6KA3P51812 740 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 MVKQ03426 396 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 SLC3A1Q07837 685 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 KRR1Q13601 381 aaKnown RBP11.65□□□□□ -0.54
TCOF1-215ENST00000515516 ENDOGQ14249 297 aaKnown RBP11.65□□□□□ -0.54
TCOF1-215ENST00000515516 MESTQ5EB52 335 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 DPY19L2P2Q6ZN68 376 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 RINLQ6ZS11 566 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 OR52J3Q8NH60 311 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 IPCEF1Q8WWN9 437 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-215ENST00000515516 RAB1CQ92928 201 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 TMEM186Q96B77 213 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 RAB39BQ96DA2 213 aa11.65□□□□□ -0.54
TCOF1-215ENST00000515516 PYURFQ96I23 114 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms