RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 FAM234AQ9H0X4 552 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 BANF2Q9H503 90 aa12.2□□□□□ -0.46
TCOF1-214ENST00000515035 ZC3H12DA2A288 527 aaKnown RBP12.19□□□□□ -0.46
TCOF1-214ENST00000515035 G0S2P27469 103 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 RPL12P30050 165 aaKnown RBP12.19□□□□□ -0.46
TCOF1-214ENST00000515035 RAB38P57729 211 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 RAB35Q15286 201 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 UCN3Q969E3 161 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 FBXW5Q969U6 566 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 NXPE3Q969Y0 559 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 METTL15P1P0C7V9 234 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 ARNTP27540 789 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 CASP6P55212 293 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 MFSD12Q6NUT3 480 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 BTNL8Q6UX41 500 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 PAQR9Q6ZVX9 377 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 TRBV11-1A0A0K0K1C0 115 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 TCRBV5S1A1TA0A578 114 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 RFPL4AA6NLU0 287 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 RFPL4AL1F8VTS6 287 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 OR10A3P58181 314 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 GABREP78334 506 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 REEP5Q00765 189 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 SSX7Q7RTT5 188 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 DCXRQ7Z4W1 244 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 CMTM4Q8IZR5 234 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 SIGLECL1Q8N7X8 197 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 MYH9P35579 1960 aaKnown RBP12.19□□□□□ -0.46
TCOF1-214ENST00000515035 TMED7-TICAM2A0A0A6YYA0 188 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 ZFAND5O76080 213 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 OR10J4P0C629 311 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 ACSM4P0C7M7 580 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 ADRA2CP18825 462 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 TNFSF4P23510 183 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 VRK3Q8IV63 474 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 NAXDQ8IW45 347 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 PFN4Q8NHR9 129 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
TCOF1-214ENST00000515035 TMED7Q9Y3B3 224 aa12.19□□□□□ -0.46
TCOF1-214ENST00000515035 TCRBV5S2A0A599 114 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 MRPL33O75394 65 aaKnown RBP12.18□□□□□ -0.46
TCOF1-214ENST00000515035 OR4E1P0C645 316 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 ZP3P21754 424 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 GDF1P27539 372 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 TMEM81Q6P7N7 255 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 RFLNAQ6ZTI6 216 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 RHBDD1Q8TEB9 315 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 WDR89Q96FK6 387 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-214ENST00000515035 FAM103A1Q9BTL3 118 aaKnown RBP12.18□□□□□ -0.46
TCOF1-214ENST00000515035 PLEKHF2Q9H8W4 249 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 LTBP4Q8N2S1 1624 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 CT45A6P0DMU7 189 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 CT45A5P0DMU8 189 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 CT45A7P0DMV0 189 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 CT45A8P0DMV1 189 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 CT45A9P0DMV2 189 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 CT45A2Q5DJT8 189 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 CT45A1Q5HYN5 189 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 AKR7LQ8NHP1 331 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 CT45A3Q8NHU0 189 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 TOE1Q96GM8 510 aaKnown RBP12.18□□□□□ -0.46
TCOF1-214ENST00000515035 ATF6BQ99941 703 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 TMPRSS5Q9H3S3 457 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF816-ZNF321PA0A0X1KG74 233 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 PRSS38A1L453 326 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 SEC14L6B5MCN3 397 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 PFN3P60673 137 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 CTF1Q16619 201 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF750Q32MQ0 723 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 PTCRAQ6ISU1 281 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-214ENST00000515035 SLC48A1Q6P1K1 146 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 TMEM71Q6P5X7 295 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 ALKAL1Q6UXT8 129 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 WDR88Q6ZMY6 472 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF321PQ8N8H1 164 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 OR51A2Q8NGJ7 313 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 RPUSD4Q96CM3 377 aaKnown RBP12.18□□□□□ -0.46
TCOF1-214ENST00000515035 SLC25A37Q9NYZ2 338 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 PADI1Q9ULC6 663 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 ZNF195O14628 629 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 OR51H1Q8NH63 302 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 RHNO1Q9BSD3 238 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 OR51I2Q9H344 312 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 SLC23A1Q9UHI7 598 aa12.18□□□□□ -0.46
TCOF1-214ENST00000515035 G3V3Q6 166 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 HSD17B6O14756 317 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 SOD1P00441 154 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 F10P00742 488 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 PTAFRP25105 342 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 ARRB2P32121 409 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 CSF2RBP32927 897 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 GABRA4P48169 554 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 MLF1P58340 268 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 SUMO1P63165 101 aaKnown RBP12.17□□□□□ -0.46
TCOF1-214ENST00000515035 LPAL2Q16609 132 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 FAM78AQ5JUQ0 283 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 OR13D1Q8NGV5 346 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 RXFP4Q8TDU9 374 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 TSLPQ969D9 159 aa12.17□□□□□ -0.46
TCOF1-214ENST00000515035 PDXPQ96GD0 296 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms