RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 FMO3P31513 532 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 POLR2IP36954 125 aaKnown RBP17.61■□□□□ 0.41
USP53-208ENST00000514305 PTDSS1P48651 473 aaKnown RBP17.61■□□□□ 0.41
USP53-208ENST00000514305 MMP16P51512 607 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 NKX6-1P78426 367 aaPredicted RBP17.61■□□□□ 0.41
USP53-208ENST00000514305 PPA1Q15181 289 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 ZNF362Q5T0B9 420 aaPredicted RBP17.61■□□□□ 0.41
USP53-208ENST00000514305 SHEQ5VZ18 495 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 TMEM53Q6P2H8 277 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 CXXC5Q7LFL8 322 aaKnown RBP17.61■□□□□ 0.41
USP53-208ENST00000514305 SLC16A14Q7RTX9 510 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 GID4Q8IVV7 300 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 TCEANCQ8N8B7 351 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 SETD9Q8NE22 299 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 FAM81AQ8TBF8 368 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 TMEM163Q8TC26 289 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 PIK3IP1Q96FE7 263 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 KCNG2Q9UJ96 466 aa17.61■□□□□ 0.41
USP53-208ENST00000514305 A0A096LPE4 126 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 A0A1W2PPZ6 126 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 C12orf71A8MTZ7 269 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 H0YAE9 185 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 PTHP01270 115 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 CRYGSP22914 178 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 EPHA2P29317 976 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 ARR3P36575 388 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 VHLP40337 213 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 FOXG1P55316 489 aaPredicted RBP17.6■□□□□ 0.41
USP53-208ENST00000514305 LSM6P62312 80 aaKnown RBP17.6■□□□□ 0.41
USP53-208ENST00000514305 HSF2Q03933 536 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 IL18R1Q13478 541 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 LCN1P1Q5VSP4 162 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 FAM27BQ5VT28 67 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 MEDAGQ5VYS4 303 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 FOXL2NBQ6ZUU3 175 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 SYT9Q86SS6 491 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 CPOQ8IVL8 374 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 OR6V1Q8N148 313 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 CYGBQ8WWM9 190 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 RFKQ969G6 155 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 PIGTQ969N2 578 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 ZNF837Q96EG3 531 aaPredicted RBP17.6■□□□□ 0.41
USP53-208ENST00000514305 Q96MT0 163 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 DDOQ99489 341 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 PITX2Q99697 317 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 CDADC1Q9BWV3 514 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 OR51V1Q9H2C8 321 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 GSX1Q9H4S2 264 aaPredicted RBP17.6■□□□□ 0.41
USP53-208ENST00000514305 RNF121Q9H920 327 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 CCNB1IP1Q9NPC3 277 aa17.6■□□□□ 0.41
USP53-208ENST00000514305 NDRG4Q9ULP0 352 aaKnown RBP17.6■□□□□ 0.41
USP53-208ENST00000514305 NIPBLQ6KC79 2804 aaeCLIP17.59■□□□□ 0.41
USP53-208ENST00000514305 DEFB108AA8MXU0 73 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 CST2P09228 141 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 B4GALT1P15291 398 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 SPI1P17947 270 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 CCKARP32238 428 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 RPS7P62081 194 aaKnown RBP17.59■□□□□ 0.41
USP53-208ENST00000514305 TSC22D1Q15714 1073 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 KLHL12Q53G59 568 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 NXNL2Q5VZ03 156 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 PLBD1Q6P4A8 553 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 BIVMQ86UB2 503 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 ZC3HAV1LQ96H79 300 aaKnown RBP17.59■□□□□ 0.41
USP53-208ENST00000514305 C18orf12Q96KH6 178 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 MBOAT4Q96T53 435 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 NMNAT2Q9BZQ4 307 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 POLE4Q9NR33 117 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 POLR1DQ9Y2S0 133 aa17.59■□□□□ 0.41
USP53-208ENST00000514305 IGLV1-36A0A0B4J1U3 117 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 IGKV1D-43A0A0B4J1Z2 117 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 SLC22A31A6NKX4 558 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 SMPD2O60906 423 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 GLCEO94923 617 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 RAB36O95755 333 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 CD79AP11912 226 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 PLP2Q04941 152 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 TMED1Q13445 227 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 SNCBQ16143 134 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 HIKESHIQ53FT3 197 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 ALDH16A1Q8IZ83 802 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 FAM169BQ8N8A8 192 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 OR9Q1Q8NGQ5 310 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 OR6K6Q8NGW6 343 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 OR52N5Q8NH56 324 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 TSSK2Q96PF2 358 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 ADI1Q9BV57 179 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 UBTD1Q9HAC8 227 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 HINT3Q9NQE9 182 aaKnown RBP17.58■□□□□ 0.4
USP53-208ENST00000514305 HSPE1-MOB4S4R3N1 261 aa17.58■□□□□ 0.4
USP53-208ENST00000514305 FAM183AA6NL82 134 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 SIAH2O43255 324 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 PRKYO43930 277 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 CDAP32320 146 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 CAPGP40121 348 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 SNRPGP62308 76 aaKnown RBP17.57■□□□□ 0.4
USP53-208ENST00000514305 TAB1Q15750 504 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 ETFDHQ16134 617 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 KCNMB1Q16558 191 aa17.57■□□□□ 0.4
USP53-208ENST00000514305 GSG1Q2KHT4 349 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms