RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 OR2AJ1Q8NGZ0 328 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 BCL2L2Q92843 193 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-214ENST00000513989 MRPL48Q96GC5 212 aaKnown RBP8.91□□□□□ -0.98
NEDD9-214ENST00000513989 BOD1Q96IK1 185 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 CNBD2Q96M20 576 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 RNF121Q9H920 327 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 SLC24A3Q9HC58 644 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 CCNB1IP1Q9NPC3 277 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 NGBQ9NPG2 151 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 POLE4Q9NR33 117 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 HAO2Q9NYQ3 351 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 DNAJC27Q9NZQ0 273 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 FBXL3Q9UKT7 428 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 POLR1DQ9Y2S0 133 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 KLF2Q9Y5W3 355 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-214ENST00000513989 TMEM14AQ9Y6G1 99 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 ARHGAP21Q5T5U3 1957 aa8.91□□□□□ -0.98
NEDD9-214ENST00000513989 VPS13CQ709C8 3753 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 A0A096LPE4 126 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 A0A1W2PPZ6 126 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 M0R129 80 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ZNF593O00488 134 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-214ENST00000513989 CASKO14936 926 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 UBL3O95164 117 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 PTHP01270 115 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ITGA5P08648 1049 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 CLUP10909 449 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 GABRB1P18505 474 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 CDAP32320 146 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 CXCR4P61073 352 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ADAM8P78325 824 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 PLP2Q04941 152 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 GABRA6Q16445 453 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 TEX30Q5JUR7 227 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 C6orf141Q5SZD1 244 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 FOXL2NBQ6ZUU3 175 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 LINGO2Q7L985 606 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ALDH16A1Q8IZ83 802 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ZNF295-AS1Q8N0V1 137 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 LRRC18Q8N456 261 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ZNF454Q8N9F8 522 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 GJC3Q8NFK1 279 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 C11orf40Q8WZ69 217 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ZMYND19Q96E35 227 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-214ENST00000513989 RNFT2Q96EX2 444 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 INTS14Q96SY0 518 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 MNTQ99583 582 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ACTR6Q9GZN1 396 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 CHCHD3Q9NX63 227 aaKnown RBP8.9□□□□□ -0.98
NEDD9-214ENST00000513989 BLOC1S6Q9UL45 172 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 AMDHD2Q9Y303 409 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 TPRKBQ9Y3C4 175 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 UGT2A1Q9Y4X1 527 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 TIMM10BQ9Y5J6 103 aa8.9□□□□□ -0.98
NEDD9-214ENST00000513989 ACANP16112 2415 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 IGKV1D-43A0A0B4J1Z2 117 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 NKX2-6A6NCS4 301 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 EFCAB10A6NFE3 127 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 TUBAL3A6NHL2 446 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 OR5H1A6NKK0 313 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 DCTN6O00399 190 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 RAD51DO75771 328 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 RAB36O95755 333 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 FADS2O95864 444 aaKnown RBP8.89□□□□□ -0.99
NEDD9-214ENST00000513989 CD79AP11912 226 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 B4GALT1P15291 398 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 SLC2A5P22732 501 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 ENTPD1P49961 510 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 SORDQ00796 357 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 SCRN3Q0VDG4 424 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 RAB40BQ12829 278 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 TBRG1Q3YBR2 411 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 SLC16A9Q7RTY1 509 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 BCDIN3DQ7Z5W3 292 aaKnown RBP8.89□□□□□ -0.99
NEDD9-214ENST00000513989 ERI1Q8IV48 349 aaKnown RBP8.89□□□□□ -0.99
NEDD9-214ENST00000513989 SKA3Q8IX90 412 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 ZNF511Q8NB15 262 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 BBS1Q8NFJ9 593 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 BPIFB6Q8NFQ5 453 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 SLC26A10Q8NG04 563 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 CNIH3Q8TBE1 160 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 S100PBPQ96BU1 408 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 FOXN4Q96NZ1 517 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 CNN2Q99439 309 aaKnown RBP8.89□□□□□ -0.99
NEDD9-214ENST00000513989 SH3GL3Q99963 347 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 MED18Q9BUE0 208 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 HCAR1Q9BXC0 346 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 YTHDF1Q9BYJ9 559 aaKnown RBP8.89□□□□□ -0.99
NEDD9-214ENST00000513989 YIPF3Q9GZM5 350 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 SLC17A5Q9NRA2 495 aa8.89□□□□□ -0.99
NEDD9-214ENST00000513989 ANKHD1Q8IWZ3 2542 aaKnown RBP8.89□□□□□ -0.99
NEDD9-214ENST00000513989 NIPBLQ6KC79 2804 aaeCLIP8.88□□□□□ -0.99
NEDD9-214ENST00000513989 ARPC4-TTLL3A0A0A6YYG9 625 aa8.88□□□□□ -0.99
NEDD9-214ENST00000513989 IQCMA0A1B0GVH7 501 aa8.88□□□□□ -0.99
NEDD9-214ENST00000513989 TVP23AA6NH52 213 aa8.88□□□□□ -0.99
NEDD9-214ENST00000513989 PHYHO14832 338 aa8.88□□□□□ -0.99
NEDD9-214ENST00000513989 WBP4O75554 376 aaKnown RBP8.88□□□□□ -0.99
NEDD9-214ENST00000513989 MPZL1O95297 269 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms