RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 RGS6P49758 472 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 RPS4XP62701 263 aaKnown RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 SLC35A1P78382 337 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 C1DQ13901 141 aaKnown RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 ETFDHQ16134 617 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 AADACL4Q5VUY2 407 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 ALKBH2Q6NS38 261 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 LINC00114Q6XXX2 140 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 WDR88Q6ZMY6 472 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 ATG4DQ86TL0 474 aaPredicted RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 NANOGP1Q8N7R0 232 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 KBTBD8Q8NFY9 601 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 OR4Q3Q8NH05 313 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 FANK1Q8TC84 345 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 APH1AQ96BI3 265 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 BPIFA2Q96DR5 249 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 MUCL1Q96DR8 90 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 LGALS12Q96DT0 336 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 MGLLQ99685 303 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 SH3GL3Q99963 347 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 ISYNA1Q9NPH2 558 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 RPS6KB2Q9UBS0 482 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 LAMP3Q9UQV4 416 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 LSM2Q9Y333 95 aaKnown RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 EXOSC1Q9Y3B2 195 aaKnown RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 ALPK2Q86TB3 2170 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 TMEM129A0AVI4 362 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 CCRL2O00421 344 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 CDC42EP2O14613 210 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 RAMP1O60894 148 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 MRPL33O75394 65 aaKnown RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 IGF2P01344 180 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 SCG5P05408 212 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 SOD3P08294 240 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 MYL12AP19105 171 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 MAKP20794 623 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 NTF4P34130 210 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 MTNR1AP48039 350 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 ATP5J2P56134 94 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 OR2B6P58173 313 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 COPZ1P61923 177 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 TMED1Q13445 227 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 SPHARQ15513 63 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 STK11Q15831 433 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 ZNF829Q3KNS6 432 aaPredicted RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 ALG10BQ5I7T1 473 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 CLEC12AQ5QGZ9 265 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 ARMC4Q5T2S8 1044 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 C1QTNF12Q5T7M4 302 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 NXNL2Q5VZ03 156 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 PAQR6Q6TCH4 344 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 GDPGP1Q6ZNW5 385 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 USP43Q70EL4 1123 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 MEX3DQ86XN8 651 aaKnown RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 GID4Q8IVV7 300 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 LNX2Q8N448 690 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 OR52I1Q8NGK6 324 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 DYNC2LI1Q8TCX1 351 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 SMAP2Q8WU79 429 aaPredicted RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 NEUROG1Q92886 237 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 BORCS5Q969J3 196 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 TRMT61AQ96FX7 289 aaKnown RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 SAMD8Q96LT4 415 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 NAA11Q9BSU3 229 aaPredicted RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 TAPBPLQ9BX59 468 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 JAM3Q9BX67 310 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 SLC19A3Q9BZV2 496 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 OR52D1Q9H346 318 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 PALMDQ9NP74 551 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 ASB6Q9NWX5 421 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 CHCHD3Q9NX63 227 aaKnown RBP8.64□□□□□ -1.03
CCL28-203ENST00000513525 TAS2R16Q9NYV7 291 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 NPAP1Q9NZP6 1156 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 SIGLEC7Q9Y286 467 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 FLVCR1Q9Y5Y0 555 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 A3GALT2U3KPV4 340 aa8.64□□□□□ -1.03
CCL28-203ENST00000513525 ZC3H12DA2A288 527 aaKnown RBP8.63□□□□□ -1.03
CCL28-203ENST00000513525 SHISA9B4DS77 424 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 BHLHE40O14503 412 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 MYL12BO14950 172 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 PTP4A3O75365 173 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 RAD51DO75771 328 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 ADRA2AP08913 450 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 PNMTP11086 282 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 GADD45AP24522 165 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 HTR1FP30939 366 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 IDUAP35475 653 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 SLC9A3P48764 834 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 CDH11P55287 796 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 MLLT11Q13015 90 aaPredicted RBP8.63□□□□□ -1.03
CCL28-203ENST00000513525 SLC17A1Q14916 467 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 MED22Q15528 200 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 GABRA6Q16445 453 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 WBP2NLQ6ICG8 309 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 OR7E24Q6IFN5 339 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 SMARCD3Q6STE5 483 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 Q71RC1 249 aaPredicted RBP8.63□□□□□ -1.03
CCL28-203ENST00000513525 DTX2Q86UW9 622 aa8.63□□□□□ -1.03
CCL28-203ENST00000513525 UBE2J2Q8N2K1 259 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms