RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 IKBKGQ9Y6K9 419 aa3.29□□□□□ -1.88
HTT-210ENST00000512909 FER1L5A0AVI2 2057 aa3.29□□□□□ -1.88
HTT-210ENST00000512909 CEP250Q9BV73 2442 aa3.29□□□□□ -1.88
HTT-210ENST00000512909 USP34Q70CQ2 3546 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 NSG1A0A0A6YYJ2 146 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 A0A1B0GX78 115 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 SGK494L7N484 410 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 PDLIM1O00151 329 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 CDC7O00311 574 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 TXNDC9O14530 226 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 HAT1O14929 419 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 RAD51CO43502 376 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 KLHL41O60662 606 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 NOL3O60936 208 aaKnown RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 PSIP1O75475 530 aaKnown RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 C8GP07360 202 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 CCDC166P0CW27 439 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 THRBP10828 461 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 DPP4P27487 766 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 RPL4P36578 427 aaKnown RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 ACVR1BP36896 505 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 MAGEA6P43360 314 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 CCR8P51685 355 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 TAS2R39P59534 338 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 RAB8AP61006 207 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 BTN3A2P78410 334 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 PRDX1Q06830 199 aaKnown RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 CKAP4Q07065 602 aaKnown RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 CD47Q08722 323 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 EXOSC2Q13868 293 aaKnown RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 GRB7Q14451 532 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 ARHGAP19Q14CB8 494 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 NCF4Q15080 339 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 UBE2V2Q15819 145 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 C18orf21Q32NC0 220 aaPredicted RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 NADK2Q4G0N4 442 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 ZNF658BQ4V348 819 aaPredicted RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 CYBRD1Q53TN4 286 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 FBXO48Q5FWF7 155 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 TCTEX1D4Q5JR98 221 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 ATAD3CQ5T2N8 411 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 RNLSQ5VYX0 342 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 OR8G2PQ6IF36 304 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 ZNF774Q6NX45 483 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 C8orf74Q6P047 294 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 MBOAT1Q6ZNC8 495 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 THOC6Q86W42 341 aaKnown RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 SLC26A11Q86WA9 606 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 BCORP1Q8N888 145 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 SPATA4Q8NEY3 305 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 FDCSPQ8NFU4 85 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 OR9A4Q8NGU2 314 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 CD200R1Q8TD46 325 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 C8orf44Q96CB5 159 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 LRRC39Q96DD0 335 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 DNAJA3Q96EY1 480 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 TSNARE1Q96NA8 513 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 IP6K3Q96PC2 410 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 PCBD2Q9H0N5 130 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 ZNF160Q9HCG1 818 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 EXOSC3Q9NQT5 275 aaKnown RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.28□□□□□ -1.88
HTT-210ENST00000512909 STMN3Q9NZ72 180 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 C3orf18Q9UK00 162 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 PDE10AQ9Y233 779 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 EIF3LQ9Y262 564 aaKnown RBP3.28□□□□□ -1.88
HTT-210ENST00000512909 SLC22A14Q9Y267 594 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 KLHDC2Q9Y2U9 406 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 RNF115Q9Y4L5 304 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 CACNA1EQ15878 2313 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 NCOR2Q9Y618 2525 aa3.28□□□□□ -1.88
HTT-210ENST00000512909 CFAP54Q96N23 3096 aa3.28□□□□□ -1.89
HTT-210ENST00000512909 LRRK1Q38SD2 2015 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 URB1O60287 2271 aaKnown RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 MYLKQ15746 1914 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 A0A0G2JN53 185 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 A0A1W2PPR1 153 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 A0A1W2PPV9 198 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 CTAGE15A4D2H0 777 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 ZNF860A6NHJ4 632 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 SUPT3HB4E1H0 165 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 GFYI3L273 518 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 PSMD12O00232 456 aaPredicted RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 PPIHO43447 177 aaKnown RBP3.27□□□□□ -1.89
HTT-210ENST00000512909 CHST10O43529 356 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 B4GALT2O60909 372 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 SUPT3HO75486 399 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 NDUFA7O95182 113 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 IFNA16P05015 189 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 CAPN1P07384 714 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 RHOXF2BP0C7M4 288 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 SLC35G6P0C7Q6 338 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 FOLR2P14207 255 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 IL1RNP18510 177 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 MMP11P24347 488 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 IVDP26440 423 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 PHBP35232 272 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 RORAP35398 523 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 GABRA4P48169 554 aa3.27□□□□□ -1.89
HTT-210ENST00000512909 TRPC1P48995 793 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms