RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 S1PR3Q99500 378 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 NAPGQ99747 312 aaPredicted RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 ILKAPQ9H0C8 392 aaPredicted RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 RNF41Q9H4P4 317 aaPredicted RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 FAM124BQ9H5Z6 455 aaPredicted RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 FOLH1BQ9HBA9 442 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 WARS2Q9UGM6 360 aaKnown RBP3.03□□□□□ -1.92
NUP54-209ENST00000510569 URGCP-MRPS24S4R325 110 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 KIF1AQ12756 1690 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 GLI3P10071 1580 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 NFAT5O94916 1531 aa3.03□□□□□ -1.92
NUP54-209ENST00000510569 NRAPQ86VF7 1730 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 NWD2Q9ULI1 1742 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 CPDO75976 1380 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 MSH6P52701 1360 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 JCADQ9P266 1359 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 AFF2P51816 1311 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 MN1Q10571 1320 aaPredicted RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 ARHGAP21Q5T5U3 1957 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 KCNE1BA0A087WTH5 132 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 A0A1W2PPE3 182 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ZNF99A8MXY4 864 aaPredicted RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 E7EWF7 191 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 CYB561D2O14569 222 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 CHUKO15111 745 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ARPC1BO15143 372 aaKnown RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 TPST2O60704 377 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 PFKFB2O60825 505 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 VAPBO95292 243 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 SNAPINO95295 136 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ANP32DO95626 131 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 F10P00742 488 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 RPN2P04844 631 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 SNRPAP09012 282 aaKnown RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 GSTA2P09210 222 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ETS2P15036 469 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 NCK1P16333 377 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 MAGP20916 626 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ZP3P21754 424 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 IGFBP5P24593 272 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 LAP3P28838 519 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 HSD11B1P28845 292 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 GTF2H1P32780 548 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 CDH5P33151 784 aaPredicted RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 SLC1A2P43004 574 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 UQCRFS1P47985 274 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 NPBWR2P48146 333 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 STK19P49842 368 aaPredicted RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 TNFSF10P50591 281 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ATP5J2P56134 94 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 NUP107P57740 925 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ARF6P62330 175 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 GABPAQ06546 454 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 RAD51Q06609 339 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 MADCAM1Q13477 382 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ZNF699Q32M78 642 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 CCDC153Q494R4 210 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 PTPN20Q4JDL3 420 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 SFT2D3Q587I9 215 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 YIF1BQ5BJH7 314 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ZNF691Q5VV52 312 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 LIPKQ5VXJ0 399 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 SLC8B1Q6J4K2 584 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 HSDL2Q6YN16 418 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 TAC4Q86UU9 113 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 PARGQ86W56 976 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 TGIF2LYQ8IUE0 185 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 MMAAQ8IVH4 418 aaKnown RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 GID4Q8IVV7 300 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ARHGAP18Q8N392 663 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 C8orf31Q8N9H6 132 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 TTC29Q8NA56 475 aaPredicted RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 OR6Q1Q8NGQ2 317 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 FBXO25Q8TCJ0 367 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 NAT6Q93015 286 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 CPNE4Q96A23 557 aaPredicted RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 OPALINQ96PE5 141 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 NDUFAF3Q9BU61 184 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 TSSK1BQ9BXA7 367 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 GSDMCQ9BYG8 508 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 SRRQ9GZT4 340 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 NXF3Q9H4D5 531 aaKnown RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 WDR54Q9H977 334 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 LPAR2Q9HBW0 351 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 RAB18Q9NP72 206 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 OR2S2Q9NQN1 319 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 USE1Q9NZ43 259 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 DPM3Q9P2X0 92 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 PSORS1C1Q9UIG5 152 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 IKZF2Q9UKS7 526 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 GSTK1Q9Y2Q3 226 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 AP3M1Q9Y2T2 418 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 PRG3Q9Y2Y8 225 aaPredicted RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 RNF115Q9Y4L5 304 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 FADS3Q9Y5Q0 445 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 DDX60Q8IY21 1712 aaKnown RBP3.02□□□□□ -1.93
NUP54-209ENST00000510569 OVOS2A0A0G2JMS6 1433 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ANKARQ7Z5J8 1434 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 ADGRL3Q9HAR2 1447 aa3.02□□□□□ -1.93
NUP54-209ENST00000510569 CEMIPQ8WUJ3 1361 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms