RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 MEF2DQ14814 521 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 EBPQ15125 230 aaKnown RBP13.5□□□□□ -0.25
USP38-202ENST00000510377 ACKR1Q16570 336 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 ELFN2Q5R3F8 820 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 LHFPL5Q8TAF8 219 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 CRISPLD2Q9H0B8 497 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 TCEAL2Q9H3H9 227 aaPredicted RBP13.5□□□□□ -0.25
USP38-202ENST00000510377 RHBDD3Q9Y3P4 386 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 SPTA1P02549 2419 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 A0A087WV48 116 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 KCNAB3O43448 404 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 CTAG2O75638 210 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 CLDN6P56747 220 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 CLRN1P58418 232 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 HTRA4P83105 476 aaPredicted RBP13.5□□□□□ -0.25
USP38-202ENST00000510377 MFSD13AQ14CX5 517 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 FAM199XQ6PEV8 388 aaPredicted RBP13.5□□□□□ -0.25
USP38-202ENST00000510377 EMC6Q9BV81 110 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 RGCCQ9H4X1 137 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 POLE3Q9NRF9 147 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 TMEM74BQ9NUR3 256 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 GDE1Q9NZC3 331 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 OR5K4A6NMS3 321 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 MED6O75586 246 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 ATG12O94817 140 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 NKX2-2O95096 273 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 SNRNP70P08621 437 aaKnown RBP13.5□□□□□ -0.25
USP38-202ENST00000510377 PPT1P50897 306 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 RPS15P62841 145 aaKnown RBP13.5□□□□□ -0.25
USP38-202ENST00000510377 PARM1Q6UWI2 310 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 DCXRQ7Z4W1 244 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 MDGA2Q7Z553 956 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 TEX19Q8NA77 164 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 OR6N1Q8NGY5 312 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 OR4K15Q8NH41 348 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 BAHD1Q8TBE0 780 aaPredicted RBP13.5□□□□□ -0.25
USP38-202ENST00000510377 ATOH1Q92858 354 aaPredicted RBP13.5□□□□□ -0.25
USP38-202ENST00000510377 HLA-CQ95604 372 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 C10orf90Q96M02 699 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 BANF2Q9H503 90 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 CHRNA9Q9UGM1 479 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 KLHDC2Q9Y2U9 406 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 CSAG2Q9Y5P2 127 aa13.5□□□□□ -0.25
USP38-202ENST00000510377 E9PQ18 207 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 NGFRP08138 427 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 ZNF704Q6ZNC4 412 aaPredicted RBP13.49□□□□□ -0.25
USP38-202ENST00000510377 ADGRE4PQ86SQ3 457 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 FJX1Q86VR8 437 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 C19orf47Q8N9M1 422 aaKnown RBP13.49□□□□□ -0.25
USP38-202ENST00000510377 BVESQ8NE79 360 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 MRPL38Q96DV4 380 aaKnown RBP13.49□□□□□ -0.25
USP38-202ENST00000510377 CDCA3Q99618 268 aaPredicted RBP13.49□□□□□ -0.25
USP38-202ENST00000510377 NXF5Q9H1B4 397 aaKnown RBP13.49□□□□□ -0.25
USP38-202ENST00000510377 LOC107986453A0A1B0GWG9 222 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 SLC33A1O00400 549 aaPredicted RBP13.49□□□□□ -0.25
USP38-202ENST00000510377 TXNL1O43396 289 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 RAB6AP20340 208 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 PSG6Q00889 435 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 DGAT2L6Q6ZPD8 337 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 CLRN3Q8NCR9 226 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 ELP5Q8TE02 316 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 CDC6Q99741 560 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 HAO2Q9NYQ3 351 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 DTX4Q9Y2E6 619 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 HCRTR1O43613 425 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 PTP4A3O75365 173 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 SERPINA5P05154 406 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 FAM157BP0CG42 384 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 ERGP11308 486 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 CRABP1P29762 137 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 ATP1B3P54709 279 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 EFNB1P98172 346 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 BAMBIQ13145 260 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 ZNF485Q8NCK3 441 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 OR4K17Q8NGC6 315 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 PNPLA2Q96AD5 504 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 SCGB3A2Q96PL1 93 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 RPP25Q9BUL9 199 aaKnown RBP13.49□□□□□ -0.25
USP38-202ENST00000510377 TANC1Q9C0D5 1861 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 GPR31O00270 319 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 GLI4P10075 376 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 DPP4P27487 766 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 SERPINF1P36955 418 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 AKR1C3P42330 323 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 C1QL3Q5VWW1 255 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 FCRL6Q6DN72 434 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 SHISA5Q8N114 240 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 STPG2Q8N412 459 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 JAM3Q9BX67 310 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 C12orf10Q9HB07 376 aa13.49□□□□□ -0.25
USP38-202ENST00000510377 CSTBP04080 98 aaKnown RBP13.48□□□□□ -0.25
USP38-202ENST00000510377 MGMTP16455 207 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 SFTPDP35247 375 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 DHRS2Q13268 280 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 SERTAD2Q14140 314 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 PDSS1Q5T2R2 415 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 TMEM244Q5VVB8 128 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 TMEM71Q6P5X7 295 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 OR2W3Q7Z3T1 314 aa13.48□□□□□ -0.25
USP38-202ENST00000510377 NT5CQ8TCD5 201 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms