RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 PPIAL4FP0DN26 164 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 ZNF12P17014 697 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 GCH1P30793 250 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 SLC6A9P48067 706 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 GDI2P50395 445 aaKnown RBP13.39□□□□□ -0.27
RAB40C-202ENST00000509637 ZNF154Q13106 437 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 TOP3AQ13472 1001 aaPredicted RBP13.39□□□□□ -0.27
RAB40C-202ENST00000509637 ZMYND11Q15326 602 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 TIMD4Q96H15 378 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 ZNF583Q96ND8 569 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 ZNF696Q9H7X3 374 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 SMURF2Q9HAU4 748 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 PATZ1Q9HBE1 687 aaKnown RBP13.39□□□□□ -0.27
RAB40C-202ENST00000509637 CCNB1IP1Q9NPC3 277 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 PURGQ9UJV8 347 aaKnown RBP13.39□□□□□ -0.27
RAB40C-202ENST00000509637 A4GNTQ9UNA3 340 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 INSIG2Q9Y5U4 225 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 SNX13Q9Y5W8 968 aa13.39□□□□□ -0.27
RAB40C-202ENST00000509637 IGHV3OR16-10A0A075B7F0 116 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 ENTPD5O75356 428 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 IGF2P01344 180 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 CST2P09228 141 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 PRTN3P24158 256 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 CD80P33681 288 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 RBM34P42696 430 aaKnown RBP13.38□□□□□ -0.27
RAB40C-202ENST00000509637 DAP3P51398 398 aaKnown RBP13.38□□□□□ -0.27
RAB40C-202ENST00000509637 CD47Q08722 323 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 SCGB2A2Q13296 93 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 MOGQ16653 247 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 LRRC28Q86X40 367 aaPredicted RBP13.38□□□□□ -0.27
RAB40C-202ENST00000509637 MICU2Q8IYU8 434 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 ZNF283Q8N7M2 679 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 SLC7A6Q92536 515 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 C4orf45Q96LM5 186 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 EMC7Q9NPA0 242 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 MAN2C1Q9NTJ4 1040 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 TMEM106BQ9NUM4 274 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 HIF3AQ9Y2N7 669 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 STARD10Q9Y365 291 aa13.38□□□□□ -0.27
RAB40C-202ENST00000509637 NPIPB13A6NJU9 1138 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 NPIPB4C9JG80 1138 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 H7C1C5 153 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 OR5F1O95221 314 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 IGHMP01871 453 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 IGHV4-38-2P0DP08 117 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 GATA3P23771 443 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 TAS2R41P59536 307 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 RPL27P61353 136 aaKnown RBP13.37□□□□□ -0.27
RAB40C-202ENST00000509637 LCN6P62502 163 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 TNFAIP6P98066 277 aaPredicted RBP13.37□□□□□ -0.27
RAB40C-202ENST00000509637 PAX8Q06710 450 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 DBPQ10586 325 aaPredicted RBP13.37□□□□□ -0.27
RAB40C-202ENST00000509637 MTX3Q5HYI7 312 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 SLC26A7Q8TE54 656 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 ITLN1Q8WWA0 313 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 DACT3Q96B18 629 aaPredicted RBP13.37□□□□□ -0.27
RAB40C-202ENST00000509637 DDX28Q9NUL7 540 aaKnown RBP13.37□□□□□ -0.27
RAB40C-202ENST00000509637 EIF3KQ9UBQ5 218 aaKnown RBP13.37□□□□□ -0.27
RAB40C-202ENST00000509637 NUP50Q9UKX7 468 aa13.37□□□□□ -0.27
RAB40C-202ENST00000509637 TRAV27A0A087WT01 109 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 MDFIC2A0A1B0GVS7 189 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 J3KTA2 159 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 FFAR1O14842 300 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 ANGPT2O15123 496 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 FOXH1O75593 365 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 ZNF205O95201 554 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 MT-ND5P03915 603 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 THRBP10828 461 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 FPR2P25090 351 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 CTXN1P60606 82 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 SRSF4Q08170 494 aaKnown RBP13.36□□□□□ -0.27
RAB40C-202ENST00000509637 ALG10Q5BKT4 473 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 TSEN54Q7Z6J9 526 aaKnown RBP13.36□□□□□ -0.27
RAB40C-202ENST00000509637 TEX29Q8N6K0 151 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 TSPEARQ8WU66 669 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 STON2Q8WXE9 905 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 POP5Q969H6 163 aaKnown RBP13.36□□□□□ -0.27
RAB40C-202ENST00000509637 CMBLQ96DG6 245 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 ALG12Q9BV10 488 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 UNKLQ9H9P5 680 aaKnown RBP13.36□□□□□ -0.27
RAB40C-202ENST00000509637 POLE4Q9NR33 117 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 PLEK2Q9NYT0 353 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 TIMM10BQ9Y5J6 103 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 AUP1Q9Y679 476 aa13.36□□□□□ -0.27
RAB40C-202ENST00000509637 DOCK11Q5JSL3 2073 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 PLSCR5A0PG75 271 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 A8MXK9 166 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 WNT2P09544 360 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 IFI30P13284 250 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 PMELP40967 661 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 YAP1P46937 504 aaKnown RBP13.35□□□□□ -0.27
RAB40C-202ENST00000509637 HOXA4Q00056 320 aaPredicted RBP13.35□□□□□ -0.27
RAB40C-202ENST00000509637 FOXL1Q12952 345 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 SLC9A3R2Q15599 337 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 FAM201AQ5SY85 155 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 TBPL2Q6SJ96 375 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 SHISA2Q6UWI4 295 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 SLC30A8Q8IWU4 369 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 OR51A7Q8NH64 312 aa13.35□□□□□ -0.27
RAB40C-202ENST00000509637 ATP6V1G3Q96LB4 118 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms