RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 PPIAL4DF5H284 164 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 H7C1C5 153 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 PTHP01270 115 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 PPIAL4FP0DN26 164 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 IGHV4-38-2P0DP08 117 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 DRD4P21917 467 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 PRTN3P24158 256 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 SLC6A9P48067 706 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 LCN6P62502 163 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 SRSF4Q08170 494 aaKnown RBP11.24□□□□□ -0.61
DDX41-210ENST00000509576 DBPQ10586 325 aaPredicted RBP11.24□□□□□ -0.61
DDX41-210ENST00000509576 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 TOP3AQ13472 1001 aaPredicted RBP11.24□□□□□ -0.61
DDX41-210ENST00000509576 NANOGP8Q6NSW7 305 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 PATL1Q86TB9 770 aaKnown RBP11.24□□□□□ -0.61
DDX41-210ENST00000509576 ZNF283Q8N7M2 679 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 TMEM239Q8WW34 195 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 SLC7A6Q92536 515 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 TXNIPQ9H3M7 391 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 SMURF2Q9HAU4 748 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 PATZ1Q9HBE1 687 aaKnown RBP11.24□□□□□ -0.61
DDX41-210ENST00000509576 EMC7Q9NPA0 242 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 MAN2C1Q9NTJ4 1040 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 GPR160Q9UJ42 338 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 A4GNTQ9UNA3 340 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 HIF3AQ9Y2N7 669 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 NDUFAF1Q9Y375 327 aa11.24□□□□□ -0.61
DDX41-210ENST00000509576 A8MXK9 166 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 IGF2P01344 180 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 IGHMP01871 453 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 MT-ND5P03915 603 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 HIST1H2ABP04908 130 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 SBK2P0C263 348 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 THRBP10828 461 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 GATA3P23771 443 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 GCH1P30793 250 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 CD80P33681 288 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 GDI2P50395 445 aaKnown RBP11.23□□□□□ -0.61
DDX41-210ENST00000509576 DAP3P51398 398 aaKnown RBP11.23□□□□□ -0.61
DDX41-210ENST00000509576 HOXA4Q00056 320 aaPredicted RBP11.23□□□□□ -0.61
DDX41-210ENST00000509576 CD47Q08722 323 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 NFYCQ13952 458 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 HIST3H2AQ7L7L0 130 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 MICU2Q8IYU8 434 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 LRRC8CQ8TDW0 803 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 ITLN1Q8WWA0 313 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 HIST1H2ACQ93077 130 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 TIMD4Q96H15 378 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 C4orf45Q96LM5 186 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 UNKLQ9H9P5 680 aaKnown RBP11.23□□□□□ -0.61
DDX41-210ENST00000509576 CCNB1IP1Q9NPC3 277 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 TMEM106BQ9NUM4 274 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 NUP50Q9UKX7 468 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 SNX13Q9Y5W8 968 aa11.23□□□□□ -0.61
DDX41-210ENST00000509576 TRAV27A0A087WT01 109 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 FFAR1O14842 300 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 ZNF205O95201 554 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 OR5F1O95221 314 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 CST2P09228 141 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 RBM34P42696 430 aaKnown RBP11.22□□□□□ -0.61
DDX41-210ENST00000509576 TNFAIP6P98066 277 aaPredicted RBP11.22□□□□□ -0.61
DDX41-210ENST00000509576 PAX8Q06710 450 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 SLC9A3R2Q15599 337 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 PDLIM3Q53GG5 364 aaPredicted RBP11.22□□□□□ -0.61
DDX41-210ENST00000509576 MTX3Q5HYI7 312 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 AGBL2Q5U5Z8 902 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 LRRC28Q86X40 367 aaPredicted RBP11.22□□□□□ -0.61
DDX41-210ENST00000509576 POP5Q969H6 163 aaKnown RBP11.22□□□□□ -0.61
DDX41-210ENST00000509576 ZNF583Q96ND8 569 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 LRMDAQ9H2I8 198 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 POLE4Q9NR33 117 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 DDX28Q9NUL7 540 aaKnown RBP11.22□□□□□ -0.61
DDX41-210ENST00000509576 PLEK2Q9NYT0 353 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 STARD10Q9Y365 291 aa11.22□□□□□ -0.61
DDX41-210ENST00000509576 CEACAM18A8MTB9 384 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 J3KTA2 159 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 ENTPD5O75356 428 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 FOXH1O75593 365 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 RNASE1P07998 156 aaKnown RBP11.21□□□□□ -0.61
DDX41-210ENST00000509576 SELEP16581 610 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 MDKP21741 143 aaPredicted RBP11.21□□□□□ -0.61
DDX41-210ENST00000509576 TAS2R41P59536 307 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 RPL27P61353 136 aaKnown RBP11.21□□□□□ -0.61
DDX41-210ENST00000509576 DEFA6Q01524 100 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 FOXL1Q12952 345 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 ALG10Q5BKT4 473 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 SHISA2Q6UWI4 295 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 TSEN54Q7Z6J9 526 aaKnown RBP11.21□□□□□ -0.61
DDX41-210ENST00000509576 TEX29Q8N6K0 151 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 OR13C2Q8NGS9 318 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 STON2Q8WXE9 905 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 ALG12Q9BV10 488 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 NTN4Q9HB63 628 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 ZDHHC8Q9ULC8 765 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 ADAM18Q9Y3Q7 739 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 AUP1Q9Y679 476 aa11.21□□□□□ -0.61
DDX41-210ENST00000509576 A0A1W2PPL8 197 aa11.2□□□□□ -0.62
DDX41-210ENST00000509576 PLSCR5A0PG75 271 aa11.2□□□□□ -0.62
DDX41-210ENST00000509576 H0YL77 283 aa11.2□□□□□ -0.62
DDX41-210ENST00000509576 TMEM178BH3BS89 294 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms