RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PPP1CBP62140 327 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 PRKCDQ05655 676 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 FAM209AQ5JX71 171 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 MBNL2Q5VZF2 373 aaKnown RBP13.09□□□□□ -0.31
TPM3-219ENST00000509409 CGB2Q6NT52 195 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 ZNF774Q6NX45 483 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 C12orf54Q6X4T0 127 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 ZNF771Q7L3S4 317 aaPredicted RBP13.09□□□□□ -0.31
TPM3-219ENST00000509409 C1orf174Q8IYL3 243 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 TEX29Q8N6K0 151 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
TPM3-219ENST00000509409 C4orf45Q96LM5 186 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 CYSLTR2Q9NS75 346 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 GMPR2Q9P2T1 348 aaKnown RBP13.09□□□□□ -0.31
TPM3-219ENST00000509409 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
TPM3-219ENST00000509409 ISPDA4D126 451 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 C12orf71A8MTZ7 269 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 H7C1C5 153 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 CXCR6O00574 342 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 NGFP01138 241 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 MSR1P21757 451 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 FUT4P22083 530 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 LIPAP38571 399 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 LCN6P62502 163 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 LIPEQ05469 1076 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 SLC3A1Q07837 685 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 ANKDD1AQ495B1 522 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 IFI44LQ53G44 452 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 TBPL2Q6SJ96 375 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 ARPINQ7Z6K5 226 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 PEG10Q86TG7 708 aaKnown RBP13.08□□□□□ -0.32
TPM3-219ENST00000509409 RNF113BQ8IZP6 322 aaKnown RBP13.08□□□□□ -0.32
TPM3-219ENST00000509409 OFCC1Q8IZS5 231 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.08□□□□□ -0.32
TPM3-219ENST00000509409 LRRC75AQ8NAA5 344 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 OR13C2Q8NGS9 318 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 RP9Q8TA86 221 aaKnown RBP13.08□□□□□ -0.32
TPM3-219ENST00000509409 GEMIN6Q8WXD5 167 aaKnown RBP13.08□□□□□ -0.32
TPM3-219ENST00000509409 GAL3ST1Q99999 423 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 GRHPRQ9UBQ7 328 aa13.08□□□□□ -0.32
TPM3-219ENST00000509409 LOC105371242A0A075B767 164 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 XKRYO14609 159 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 SLC22A2O15244 555 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 TIMM8AO60220 97 aaPredicted RBP13.07□□□□□ -0.32
TPM3-219ENST00000509409 IGHV2-5P01817 119 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 SLC9A3P48764 834 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 MMP15P51511 669 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 RFPL4BQ6ZWI9 263 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 MBOAT2Q6ZWT7 520 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 SYT9Q86SS6 491 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 CYP4Z1Q86W10 505 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 TREML1Q86YW5 311 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 SLC15A3Q8IY34 581 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 ACOT11Q8WXI4 607 aaPredicted RBP13.07□□□□□ -0.32
TPM3-219ENST00000509409 NDEL1Q9GZM8 345 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 UBAP1Q9NZ09 502 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 ZDHHC8Q9ULC8 765 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 NDRG4Q9ULP0 352 aaKnown RBP13.07□□□□□ -0.32
TPM3-219ENST00000509409 PCDHB10Q9UN67 800 aa13.07□□□□□ -0.32
TPM3-219ENST00000509409 A0A087WUU8 490 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 A0A0G2JMP0 313 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 A0A0X1KG70 313 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 ZSCAN5BA6NJL1 495 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 FFAR1O14842 300 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 ABHD16AO95870 558 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 SERPINA1P01009 418 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 SCG5P05408 212 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 COX4I1P13073 169 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 EPHA1P21709 976 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 GPR4P46093 362 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 GUCY1A3Q02108 690 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 ENDOGQ14249 297 aaKnown RBP13.06□□□□□ -0.32
TPM3-219ENST00000509409 ZBED5Q49AG3 693 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 ZMAT1Q5H9K5 638 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 DCAF12L2Q5VW00 463 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 CBLL1Q75N03 491 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 ZER1Q7Z7L7 766 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 OR4M2Q8NGB6 313 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 FAM162AQ96A26 154 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 HSH2DQ96JZ2 352 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 DCLRE1CQ96SD1 692 aaKnown RBP13.06□□□□□ -0.32
TPM3-219ENST00000509409 DIRC2Q96SL1 478 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 HOPXQ9BPY8 73 aaPredicted RBP13.06□□□□□ -0.32
TPM3-219ENST00000509409 RERGLQ9H628 205 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 MSL2Q9HCI7 577 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 EMC7Q9NPA0 242 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 G6PC2Q9NQR9 355 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 POLE4Q9NR33 117 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 MAN2C1Q9NTJ4 1040 aa13.06□□□□□ -0.32
TPM3-219ENST00000509409 H3BSA7 217 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 DEAF1O75398 565 aaPredicted RBP13.05□□□□□ -0.32
TPM3-219ENST00000509409 UBOX5O94941 541 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 AVPP01185 164 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 CD14P08571 375 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 GSTM3P21266 225 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 TNFSF4P23510 183 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 HTR5AP47898 357 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 SLC7A2P52569 658 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 ACTG1P63261 375 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 TNFAIP6P98066 277 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms