RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CCR8P51685 355 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 POLR2HP52434 150 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 RABGGTBP53611 331 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 AIMP2Q13155 320 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 EBPQ15125 230 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 TCTN1Q2MV58 587 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 C6orf136Q5SQH8 315 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 LDLRAD2Q5SZI1 272 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 TMEM225Q6GV28 225 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 ENPP7Q6UWV6 458 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 Q6ZVU0 165 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 FAM129CQ86XR2 697 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 SLC5A8Q8N695 610 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 ARL14EPQ8N8R7 260 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 COLGALT1Q8NBJ5 622 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 NOXO1Q8NFA2 376 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 OR5D16Q8NGK9 328 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 OR1P1Q8NH06 330 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 FAM151AQ8WW52 585 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 SMARCD2Q92925 531 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 THOC3Q96J01 351 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 SLC46A1Q96NT5 459 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 PEBP4Q96S96 227 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 SSBP4Q9BWG4 385 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 SPATC1LQ9H0A9 340 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 ZBP1Q9H171 429 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 BEX1Q9HBH7 125 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 CDH20Q9HBT6 801 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 GPR35Q9HC97 309 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 SLC17A5Q9NRA2 495 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 TMEM140Q9NV12 185 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 GPATCH2Q9NW75 528 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 RAB22AQ9UL26 194 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 TMEM272A0A1B0GTI8 110 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 C9JQL5 133 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 TRAPPC2LH3BP13 241 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 SCDO00767 359 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 ATF1P18846 271 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 CORO1AP31146 461 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 GJA4P35212 333 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 OPRD1P41143 372 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 OR3A2P47893 321 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 MVDP53602 400 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 RAB40BQ12829 278 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 GINS1Q14691 196 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 TCTEX1D4Q5JR98 221 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 LY6G6FQ5SQ64 297 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 TNFAIP8L2Q6P589 184 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 DNM1P46Q6ZS02 220 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 ARHGAP12Q8IWW6 846 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 BEST3Q8N1M1 668 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 OR4D6Q8NGJ1 314 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 OR52I1Q8NGK6 324 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 GEMIN6Q8WXD5 167 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 MCHR2Q969V1 340 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 LYSMD1Q96S90 227 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 SCRT1Q9BWW7 348 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 AGO4Q9HCK5 861 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 TMEM242Q9NWH2 141 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 PPP1R3CQ9UQK1 317 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 RHBDD3Q9Y3P4 386 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 LY75O60449 1722 aa9.8□□□□□ -0.84
PDLIM5-210ENST00000508216 TVP23AA6NH52 213 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 C1QTNF3-AMACRE9PGA6 284 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 KLRC4-KLRK1H3BQV0 150 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 TNFRSF11BO00300 401 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 YY2O15391 372 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 SCGNO76038 276 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 SNAI1O95863 264 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 VSIG10L2P0DP72 767 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 FAHP16930 419 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 MAOAP21397 527 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 FCARP24071 287 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 KDELR2P33947 212 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 CNR2P34972 360 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 SULT1A2P50226 295 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 C2orf68Q2NKX9 166 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 PLPPR5Q32ZL2 321 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 LINC00303Q3SY05 128 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 RAB41Q5JT25 222 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 SFXN4Q6P4A7 337 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 TEX43Q6ZNM6 134 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 SLCO4C1Q6ZQN7 724 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 GDF7Q7Z4P5 450 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 C20orf196Q8IYI0 205 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 OR52J3Q8NH60 311 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 RHEBL1Q8TAI7 183 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 Q8WTZ3 238 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 FRZBQ92765 325 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 BCL2L2Q92843 193 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 REEP6Q96HR9 211 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 TSSK6Q9BXA6 273 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 RAB33BQ9H082 229 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 SIDT1Q9NXL6 827 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 TAS2R13Q9NYV9 303 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 COMMD9Q9P000 198 aa9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 YARS2Q9Y2Z4 477 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-210ENST00000508216 EP400Q96L91 3159 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 256 ms