RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 EGR3Q06889 387 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 SELENBP1Q13228 472 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 PAN3Q58A45 887 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 MRGPRX1Q96LB2 322 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 EMC6Q9BV81 110 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 KCNIP2Q9NS61 270 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 hCG_1809904A0A1W2PP81 198 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 A0A1W2PPE2 198 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 A0A1W2PR64 198 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 A0A1W2PRV1 198 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 RAB19A4D1S5 217 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 NKX6-3A6NJ46 265 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 AADACP22760 399 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 HIST2H3PS2Q5TEC6 136 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 KCNJ15Q99712 375 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 TEX101Q9BY14 249 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 SPACA1Q9HBV2 294 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 CHST2Q9Y4C5 530 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 PAPPA2Q9BXP8 1791 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 FXYD1O00168 92 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 TSPAN12O95859 305 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 LALBAP00709 142 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 ZADH2Q8N4Q0 377 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 STT3BQ8TCJ2 826 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 BTF3L4Q96K17 158 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 PRRC2BQ5JSZ5 2229 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 ETHE1O95571 254 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 RAB4AP20338 218 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 RBP2P50120 134 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 OR6K3Q8NGY3 331 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 EMG1Q92979 244 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 PLEKHF2Q9H8W4 249 aa15.09■□□□□ 0.01
PCDHA1-203ENST00000504120 ARPC4-TTLL3A0A0A6YYG9 625 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 ZNF732B4DXR9 585 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 CTSLP07711 333 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 QDPRP09417 244 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 GLULP15104 373 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 CCL11P51671 97 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 PPP2CBP62714 309 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 PPP2CAP67775 309 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 CLINT1Q14677 625 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 TMEM71Q6P5X7 295 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 TERB2Q8NHR7 220 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 C16orf52Q8NHV5 167 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 TMEM43Q9BTV4 400 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 RNF167Q9H6Y7 350 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 OR51B4Q9Y5P0 310 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 DSCR3O14972 297 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 SCAF4O95104 1147 aaKnown RBP15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 PRKACAP17612 351 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 SCGB2A2Q13296 93 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 SOWAHCQ53LP3 525 aaPredicted RBP15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 TMEM200AQ86VY9 491 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 OR5M1Q8NGP8 315 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 OR1S2Q8NGQ3 325 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 OR2A1Q8NGT9 310 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 IFI44Q8TCB0 444 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 B3GALT5Q9Y2C3 310 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 TIMM10BQ9Y5J6 103 aa15.08■□□□□ 0.01
PCDHA1-203ENST00000504120 MYO9BQ13459 2157 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 FITM1A5D6W6 292 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 STMND1H3BQB6 276 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 DEGS1O15121 323 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 DFFBO76075 338 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 EDN3P14138 238 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 SELEP16581 610 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 RPL18Q07020 188 aaKnown RBP15.08■□□□□ 0
PCDHA1-203ENST00000504120 PAQR6Q6TCH4 344 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 ZFP82Q8N141 532 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 OR52I2Q8NH67 350 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 SCARB1Q8WTV0 552 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 C3orf49Q96BT1 292 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 DECR2Q9NUI1 292 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 DOCK1Q14185 1865 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 AIPO00170 330 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 CEACAM5P06731 702 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 GIPP09681 153 aaPredicted RBP15.08■□□□□ 0
PCDHA1-203ENST00000504120 CTXN2P0C2S0 81 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 ANXA7P20073 488 aaKnown RBP15.08■□□□□ 0
PCDHA1-203ENST00000504120 ARRB2P32121 409 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 FAM53BQ14153 422 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 OXA1LQ15070 435 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 OR8B8Q15620 311 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 VWA2Q5GFL6 755 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 SOHLH1Q5JUK2 328 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 INTS12Q96CB8 462 aaKnown RBP15.08■□□□□ 0
PCDHA1-203ENST00000504120 SEH1LQ96EE3 360 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 RTL8AQ9BWD3 113 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 C12orf49Q9H741 205 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 HRH3Q9Y5N1 445 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 SULT1C4O75897 302 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 IL3RAP26951 378 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 GPR85P60893 370 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 PHLDA2Q53GA4 152 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 BANF2Q9H503 90 aa15.08■□□□□ 0
PCDHA1-203ENST00000504120 SCN9AQ15858 1988 aa15.07■□□□□ 0
PCDHA1-203ENST00000504120 A0A1W2PPC4 97 aa15.07■□□□□ 0
PCDHA1-203ENST00000504120 OR6C65A6NJZ3 312 aa15.07■□□□□ 0
PCDHA1-203ENST00000504120 SMLR1H3BR10 107 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms