RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PTBP2Q9UKA9 531 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 ARL2BPQ9Y2Y0 163 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 ASB3Q9Y575 518 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 NUP210LQ5VU65 1888 aa2.03□□□□□ -2.09
RIF1-212ENST00000498041 TECTAO75443 2155 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 IGLV3-16A0A075B6K0 115 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 IGHV1OR15-9A0A0B4J2B8 117 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 PRORSD1PA6NEY8 169 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 FRG2CA6NGY1 282 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 GOLGA6L10A6NI86 522 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 A8MUA0 341 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 VGLL3A8MV65 326 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 C10orf142B7Z368 130 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 NPIPA7E9PJI5 369 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 H0Y9J4 135 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 TMX2-CTNND1H3BSU7 103 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 FXYD1O00168 92 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 MANBAO00462 879 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 SLC17A2O00624 439 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 NME4O00746 187 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 CDX4O14627 284 aaPredicted RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 PRMT5O14744 637 aaPredicted RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 HDAC3O15379 428 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 SLC2A10O95528 541 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 CPSF4O95639 269 aaKnown RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 ATP6V1G2O95670 118 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 CLIC3O95833 236 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 APODP05090 189 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 RPSAP08865 295 aaKnown RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 NPIPA8P0DM63 369 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 GFAPP14136 432 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 CPMP14384 443 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 DESP17661 470 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 OGNP20774 298 aaKnown RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 IDSP22304 550 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 HOXA9P31269 272 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 RBMXP38159 391 aaKnown RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 OR1D4P47884 311 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 SERPINB9P50453 376 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 GZMMP51124 257 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 CCL11P51671 97 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 GFERP55789 205 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 RAG2P55895 527 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 MTPNP58546 118 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 RAB8AP61006 207 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 AP1S1P61966 158 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 RAD51Q06609 339 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 SMARCB1Q12824 385 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 RPA4Q13156 261 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 CHIT1Q13231 466 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 SERTAD2Q14140 314 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 FZD2Q14332 565 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 DMC1Q14565 340 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 ITIH4Q14624 930 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 RFTN1Q14699 578 aaPredicted RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 C2orf76Q3KRA6 126 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 CMPK2Q5EBM0 449 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 IL23RQ5VWK5 629 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 OR4F3Q6IEY1 312 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 FRMPD2BQ6IN97 320 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 FAM45BPQ6NSW5 357 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 AGTRAPQ6RW13 159 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 ENPP6Q6UWR7 440 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 DLEU7Q6UYE1 221 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 DPY19L2P2Q6ZN68 376 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 RGS9BPQ6ZS82 235 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 SHISA6Q6ZSJ9 500 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 CYS1Q717R9 158 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 BZW1Q7L1Q6 419 aaKnown RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 THOC6Q86W42 341 aaKnown RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 RBM45Q8IUH3 476 aaKnown RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 CRLF3Q8IUI8 442 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 PEX5LQ8IYB4 626 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 DEFB107AQ8IZN7 70 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 SLC25A45Q8N413 288 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 LIX1Q8N485 282 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 TRAM1L1Q8N609 369 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 TMEM105Q8N8V8 129 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 OR4D11Q8NGI4 311 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 OR13F1Q8NGS4 319 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 OR2T3Q8NH03 318 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 OR5AK3PQ8NH89 298 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 FBXO30Q8TB52 745 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 FAM45AQ8TCE6 357 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 TWIST2Q8WVJ9 160 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 OR8D1Q8WZ84 308 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 DLX4Q92988 240 aaPredicted RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 NEIL2Q969S2 332 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 TMEM45BQ96B21 275 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 PPWD1Q96BP3 646 aaKnown RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 MED8Q96G25 268 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 COX14Q96I36 57 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 VSIG2Q96IQ7 327 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 CABS1Q96KC9 395 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 TSSK3Q96PN8 268 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 VAT1Q99536 393 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 TBCDQ9BTW9 1192 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 HCAR1Q9BXC0 346 aa2.02□□□□□ -2.09
RIF1-212ENST00000498041 OPN3Q9H1Y3 402 aaPredicted RBP2.02□□□□□ -2.09
RIF1-212ENST00000498041 OR52A5Q9H2C5 316 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms