RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 LCN8Q6JVE9 175 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 C1orf94Q6P1W5 598 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 ZNF101Q8IZC7 436 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 FANK1Q8TC84 345 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 BCAS4Q8TDM0 211 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 NEU4Q8WWR8 484 aaPredicted RBP12.42□□□□□ -0.42
PDAP1-204ENST00000496335 ERMAPQ96PL5 475 aaPredicted RBP12.42□□□□□ -0.42
PDAP1-204ENST00000496335 PIMREGQ9BSJ6 248 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 NUAK2Q9H093 628 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 OR52D1Q9H346 318 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 YAE1D1Q9NRH1 226 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 VSX1Q9NZR4 365 aaPredicted RBP12.42□□□□□ -0.42
PDAP1-204ENST00000496335 COA3Q9Y2R0 106 aaPredicted RBP12.42□□□□□ -0.42
PDAP1-204ENST00000496335 LYVE1Q9Y5Y7 322 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 A0A1W2PPW3 197 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 C12orf71A8MTZ7 269 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 NDUFS8O00217 210 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 TNFRSF11BO00300 401 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 CD5LO43866 347 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 KHDRBS3O75525 346 aaKnown RBP12.41□□□□□ -0.42
PDAP1-204ENST00000496335 MPZL1O95297 269 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 STAMBPO95630 424 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 GPANK1O95872 356 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 TXNDC12O95881 172 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 NAT2P11245 290 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 USF1P22415 310 aaPredicted RBP12.41□□□□□ -0.42
PDAP1-204ENST00000496335 MAGEA2P43356 314 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 GSSP48637 474 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 GDI2P50395 445 aaKnown RBP12.41□□□□□ -0.42
PDAP1-204ENST00000496335 HMGA2P52926 109 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 PCBD1P61457 104 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 MTX3Q5HYI7 312 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 SPATA46Q5T0L3 261 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 PGBD2Q6P3X8 592 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 ADCK1Q86TW2 530 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 ALDH16A1Q8IZ83 802 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 OR9Q2Q8NGE9 314 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 OR1J1Q8NGS3 322 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 SYNPRQ8TBG9 265 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 GNPDA2Q8TDQ7 276 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 C11orf40Q8WZ69 217 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 CCDC124Q96CT7 223 aaKnown RBP12.41□□□□□ -0.42
PDAP1-204ENST00000496335 SAMD8Q96LT4 415 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 TSSK2Q96PF2 358 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 IFT27Q9BW83 186 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 BCL2L14Q9BZR8 327 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 BPESC1Q9GZL8 116 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 MUC13Q9H3R2 512 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 MS4A5Q9H3V2 200 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 MYOZ1Q9NP98 299 aaPredicted RBP12.41□□□□□ -0.42
PDAP1-204ENST00000496335 TAAR3PQ9P1P4 343 aa12.41□□□□□ -0.42
PDAP1-204ENST00000496335 PRPF19Q9UMS4 504 aaKnown RBP12.41□□□□□ -0.42
PDAP1-204ENST00000496335 DCTN6O00399 190 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 KRT36O76013 467 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 NGFP01138 241 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 HPXP02790 462 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 ZNF250P15622 560 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 SLC6A6P31641 620 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 IFNGR2P38484 337 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 KLF3P57682 345 aaPredicted RBP12.4□□□□□ -0.42
PDAP1-204ENST00000496335 TSPAN31Q12999 210 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 TRPM8Q7Z2W7 1104 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 ZNF786Q8N393 782 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 OR4C15Q8NGM1 316 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 UBASH3BQ8TF42 649 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 NMNAT3Q96T66 252 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 BTBD10Q9BSF8 475 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 THTPAQ9BU02 230 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 C1orf21Q9H246 121 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 MAGIXQ9H6Y5 334 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 EGLN3Q9H6Z9 239 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 VNN3Q9NY84 501 aa12.4□□□□□ -0.42
PDAP1-204ENST00000496335 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.4□□□□□ -0.427e-9■■□□□ 12.4
PDAP1-204ENST00000496335 IGLV3-9A0A075B6K5 115 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 IGHV4-61A0A0C4DH41 118 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 ARPC3O15145 178 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 UBOX5O94941 541 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 GASTP01350 101 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 APEHP13798 732 aaKnown RBP12.39□□□□□ -0.43
PDAP1-204ENST00000496335 HIST1H1CP16403 213 aaKnown RBP12.39□□□□□ -0.43
PDAP1-204ENST00000496335 MPV17P39210 176 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 CENPAP49450 140 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 SELENOVP59797 346 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 GLO1Q04760 184 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 FAM98BQ52LJ0 330 aaKnown RBP12.39□□□□□ -0.43
PDAP1-204ENST00000496335 ELFN2Q5R3F8 820 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 LEG1Q6P5S2 330 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 ZNF620Q6ZNG0 422 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 RFPL4BQ6ZWI9 263 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.39□□□□□ -0.43
PDAP1-204ENST00000496335 SYT9Q86SS6 491 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 GLB1L2Q8IW92 636 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 OR4K13Q8NH42 304 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 GTF3AQ92664 365 aaKnown RBP12.39□□□□□ -0.43
PDAP1-204ENST00000496335 ASB9Q96DX5 294 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 TRIM15Q9C019 465 aa12.39□□□□□ -0.43
PDAP1-204ENST00000496335 SRA1Q9HD15 236 aaKnown RBP12.39□□□□□ -0.43
PDAP1-204ENST00000496335 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
PDAP1-204ENST00000496335 U3KQV3 271 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms