RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 LAP3P28838 519 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 THBS4P35443 961 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 ADIPOQQ15848 244 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 CLEC12BQ2HXU8 276 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 SLC36A3Q495N2 470 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 C11orf71Q6IPW1 123 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 FAHD1Q6P587 224 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 LEG1Q6P5S2 330 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 SYT9Q86SS6 491 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 GLB1L2Q8IW92 636 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 LNX2Q8N448 690 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 ICA1LQ8NDH6 482 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 OR4K13Q8NH42 304 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 PLA2G12AQ9BZM1 189 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 SEMA6AQ9H2E6 1030 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 DYNLRB1Q9NP97 96 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 EIF3KQ9UBQ5 218 aaKnown RBP14.17□□□□□ -0.14
SF3A1-209ENST00000496189 KLHL21Q9UJP4 597 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 POLR1DQ9Y2S0 133 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 UGT2A1Q9Y4X1 527 aa14.17□□□□□ -0.14
SF3A1-209ENST00000496189 PRRC2AP48634 2157 aaKnown RBP14.17□□□□□ -0.14
SF3A1-209ENST00000496189 ERICH4A6NGS2 130 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 RIIAD1A6NNX1 92 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 FAM171A2A8MVW0 826 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 H3BNX3 289 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 BHLHE40O14503 412 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 ZNF35P13682 527 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 HIST1H1CP16403 213 aaKnown RBP14.16□□□□□ -0.14
SF3A1-209ENST00000496189 ZNF32P17041 273 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 CCNOP22674 350 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 CDKN2AP42771 156 aaKnown RBP14.16□□□□□ -0.14
SF3A1-209ENST00000496189 RAD52P43351 418 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 GDI2P50395 445 aaKnown RBP14.16□□□□□ -0.14
SF3A1-209ENST00000496189 HGFACQ04756 655 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.16□□□□□ -0.14
SF3A1-209ENST00000496189 SCRN3Q0VDG4 424 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 EFNB3Q15768 340 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 PABPC1L2AQ5JQF8 200 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 SLC35F1Q5T1Q4 408 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 SLC27A4Q6P1M0 643 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 ARL9Q6T311 187 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 OR52E2Q8NGJ4 325 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 OR8D4Q8NGM9 314 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 FGFBP3Q8TAT2 258 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 NABP1Q96AH0 204 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 C18orf12Q96KH6 178 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 ZNF75AQ96N20 296 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 NMNAT3Q96T66 252 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 PKP2Q99959 881 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 VRK1Q99986 396 aaPredicted RBP14.16□□□□□ -0.14
SF3A1-209ENST00000496189 GABARAPL1Q9H0R8 117 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 POLE4Q9NR33 117 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 KRT84Q9NSB2 600 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 REV1Q9UBZ9 1251 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 GPR160Q9UJ42 338 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 OAZ3Q9UMX2 235 aa14.16□□□□□ -0.14
SF3A1-209ENST00000496189 ITPR3Q14573 2671 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 SSX4O60224 188 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 SNAP29O95721 258 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 IGHV4-39P01824 125 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 HMGN1P05114 100 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 IGFBP1P08833 259 aaPredicted RBP14.15□□□□□ -0.14
SF3A1-209ENST00000496189 MMP7P09237 267 aaPredicted RBP14.15□□□□□ -0.14
SF3A1-209ENST00000496189 CTLA4P16410 223 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 ZNF3P17036 446 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 STOMP27105 288 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 GRK5P34947 590 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 GLRXP35754 106 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 DAPP51397 102 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 DSCR9P59020 149 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 SWI5Q1ZZU3 235 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 RGS7BPQ6MZT1 257 aaPredicted RBP14.15□□□□□ -0.14
SF3A1-209ENST00000496189 CLEC2AQ6UVW9 174 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 FOXL2NBQ6ZUU3 175 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 PTCHD4Q6ZW05 846 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 PARP8Q8N3A8 854 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 OR10H5Q8NGA6 315 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 RBM4BQ9BQ04 359 aaKnown RBP14.15□□□□□ -0.14
SF3A1-209ENST00000496189 RHNO1Q9BSD3 238 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 RBM4Q9BWF3 364 aaKnown RBP14.15□□□□□ -0.14
SF3A1-209ENST00000496189 ZNF416Q9BWM5 594 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 BCL2L14Q9BZR8 327 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 NUAK2Q9H093 628 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 RAB1BQ9H0U4 201 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 NDRG4Q9ULP0 352 aaKnown RBP14.15□□□□□ -0.14
SF3A1-209ENST00000496189 ORC6Q9Y5N6 252 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 ARID1AO14497 2285 aa14.15□□□□□ -0.14
SF3A1-209ENST00000496189 SAC3D1A6NKF1 404 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 TP53P04637 393 aaPredicted RBP14.14□□□□□ -0.15
SF3A1-209ENST00000496189 LCKP06239 509 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 CSF3P09919 207 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 APEX1P27695 318 aaKnown RBP14.14□□□□□ -0.15
SF3A1-209ENST00000496189 PPOXP50336 477 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 EFNA4P52798 201 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 ESRRGP62508 458 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 GLO1Q04760 184 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 AQP6Q13520 282 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 GINS1Q14691 196 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 KRTAP1-3Q8IUG1 177 aa14.14□□□□□ -0.15
SF3A1-209ENST00000496189 ZNF584Q8IVC4 421 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms