RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	MALRD1	Q5VYJ5	2156 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	LOC100509620	A0A075B734	347 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327		A0A1W2PPW3	197 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327		H3BSA7	217 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	SOCS2	O14508	198 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	IMPA2	O14732	288 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	KRT36	O76013	467 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	STAMBP	O95630	424 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	LCK	P06239	509 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	T-ENOL	P0DO92	83 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	COX5B	P10606	129 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	SLC6A6	P31641	620 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	WNT5A	P41221	380 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	ALDH3B1	P43353	468 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	GSS	P48637	474 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	GDI2	P50395	445 aa	Known RBP	11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	HMGA2	P52926	109 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	SELENOV	P59797	346 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	ERVS71-1	P61550	626 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	SCRN3	Q0VDG4	424 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	TRIM25	Q14258	630 aa	Known RBP	11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	RFX4	Q33E94	735 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	C1orf94	Q6P1W5	598 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	CYP2R1	Q6VVX0	501 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	RINL	Q6ZS11	566 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	PTCHD4	Q6ZW05	846 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	LINC00471	Q8N535	108 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	SYNPR	Q8TBG9	265 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	UBASH3B	Q8TF42	649 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	C11orf40	Q8WZ69	217 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	BPESC1	Q9GZL8	116 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	OR51B6	Q9H340	312 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	DUSP13	Q9UII6	198 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	GPR160	Q9UJ42	338 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	NDRG4	Q9ULP0	352 aa	Known RBP	11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	IER3IP1	Q9Y5U9	82 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	LYVE1	Q9Y5Y7	322 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	JMJD1C	Q15652	2540 aa		11.43	□□□□□ -0.58
RBM28-208	ENST00000495327	C5orf49	A4QMS7	147 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	ARPC3	O15145	178 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	CRLF1	O75462	422 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	KHDRBS3	O75525	346 aa	Known RBP	11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	PPP1R3D	O95685	299 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	CLPTM1	O96005	669 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	SCG5	P05408	212 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	IGHV4-31	P0DP07	118 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	GZMK	P49863	264 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	LSM6	P62312	80 aa	Known RBP	11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	TSPAN31	Q12999	210 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	AQP6	Q13520	282 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	RIN1	Q13671	783 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	GGTLC2	Q14390	218 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	CARTPT	Q16568	116 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	NKPD1	Q17RQ9	610 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	ZNF774	Q6NX45	483 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	PGBD2	Q6P3X8	592 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	DNM1P34	Q6PK57	102 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	ZNF620	Q6ZNG0	422 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	DHFR2	Q86XF0	187 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	GLB1L2	Q8IW92	636 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	ZNF101	Q8IZC7	436 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	OR1J1	Q8NGS3	322 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	ASB9	Q96DX5	294 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	FOXN4	Q96NZ1	517 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	TRIM15	Q9C019	465 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	EMC7	Q9NPA0	242 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	SLCO1C1	Q9NYB5	712 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	EIF3K	Q9UBQ5	218 aa	Known RBP	11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	SVEP1	Q4LDE5	3571 aa		11.42	□□□□□ -0.58
RBM28-208	ENST00000495327	IGHV4-61	A0A0C4DH41	118 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327		A8MV72	311 aa	Predicted RBP	11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	SLC16A7	O60669	478 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	IGHV3-13	P01766	116 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	TACSTD2	P09758	323 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	ZNF23	P17027	643 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	CCNO	P22674	350 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	CRABP1	P29762	137 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	CDKN2A	P42771	156 aa	Known RBP	11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	MRPS11	P82912	194 aa	Known RBP	11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	ELFN2	Q5R3F8	820 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	RPL13AP3	Q6NVV1	102 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	PGM2L1	Q6PCE3	622 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	UGT2A3	Q6UWM9	527 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	RFPL4B	Q6ZWI9	263 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	OR4C15	Q8NGM1	316 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	GNPDA2	Q8TDQ7	276 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	SNX33	Q8WV41	574 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	ERMAP	Q96PL5	475 aa	Predicted RBP	11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	BTBD10	Q9BSF8	475 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	NUAK2	Q9H093	628 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	RACGAP1	Q9H0H5	632 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	ELOVL3	Q9HB03	270 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	YAE1D1	Q9NRH1	226 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	TMEM160	Q9NX00	188 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	NKIRAS2	Q9NYR9	191 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	TAS2R1	Q9NYW7	299 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	TAAR3P	Q9P1P4	343 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	ATPIF1	Q9UII2	106 aa		11.41	□□□□□ -0.58
RBM28-208	ENST00000495327	COA3	Q9Y2R0	106 aa	Predicted RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms