RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 RFX4Q33E94 735 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 KRTAP27-1Q3LI81 207 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 ZBED5Q49AG3 693 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 COA6Q5JTJ3 125 aaKnown RBP4.29□□□□□ -1.72
SMC2-205ENST00000493955 TMEM179Q6ZVK1 233 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 ZNF584Q8IVC4 421 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 JAGN1Q8N5M9 183 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 OR52K1Q8NGK4 314 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 SERPINB12Q96P63 405 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 UCK2Q9BZX2 261 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 ACTR3CQ9C0K3 210 aaPredicted RBP4.29□□□□□ -1.72
SMC2-205ENST00000493955 CYP3A43Q9HB55 503 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 DAZ3Q9NR90 486 aaKnown RBP4.29□□□□□ -1.72
SMC2-205ENST00000493955 PRR34Q9NV39 138 aa4.29□□□□□ -1.72
SMC2-205ENST00000493955 A2MP01023 1474 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 CCDC18Q5T9S5 1454 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 FYCO1Q9BQS8 1478 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 ARHGAP23Q9P227 1491 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 IQGAP1P46940 1657 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 MROH1Q8NDA8 1641 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 CROCCQ5TZA2 2017 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 A2ML1A8K2U0 1454 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 M0R3G1 203 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 PEX7O00628 323 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 SCAMP2O15127 329 aaKnown RBP4.28□□□□□ -1.72
SMC2-205ENST00000493955 DPM1O60762 260 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 AIFM1O95831 613 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 C6orf47O95873 294 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 IGLV1-47P01700 117 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 UBCP0CG48 685 aaKnown RBP4.28□□□□□ -1.72
SMC2-205ENST00000493955 CTRLP40313 264 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 STXBP1P61764 594 aaKnown RBP4.28□□□□□ -1.72
SMC2-205ENST00000493955 RPS21P63220 83 aaKnown RBP4.28□□□□□ -1.72
SMC2-205ENST00000493955 ZNF79Q15937 498 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 FRMPD2BQ6IN97 320 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 SPESP1Q6UW49 350 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 H2AFVQ71UI9 128 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 COX15Q7KZN9 410 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 DCAF4L2Q8NA75 395 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 CCDC54Q8NEL0 328 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 NPBQ8NG41 125 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 OR5K2Q8NHB8 316 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 ECHDC3Q96DC8 303 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 SLC35E1Q96K37 410 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 GABARAPL3Q9BY60 117 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 RETNQ9HD89 108 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 PXMP2Q9NR77 195 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 CTPS2Q9NRF8 586 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 SMAD5-AS1Q9Y6J3 95 aa4.28□□□□□ -1.72
SMC2-205ENST00000493955 RNF17Q9BXT8 1623 aaKnown RBP4.28□□□□□ -1.73
SMC2-205ENST00000493955 UBR1Q8IWV7 1749 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 HIDE1A8MVS5 230 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 XKRYO14609 159 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 TRAF3IP2O43734 574 aaPredicted RBP4.27□□□□□ -1.73
SMC2-205ENST00000493955 CLDN11O75508 207 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 UTS2O95399 124 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 INSP01308 110 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 SERPINE2P07093 398 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 CRISP2P16562 243 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 TUBG1P23258 451 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 SLC1A2P43004 574 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 RAD51Q06609 339 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 TRAM2Q15035 370 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 STUMQ69YW2 141 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 C8orf31Q8N9H6 132 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 OR52E5Q8NH55 327 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 MCOLN3Q8TDD5 553 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 ZNF75CPQ92670 426 aaPredicted RBP4.27□□□□□ -1.73
SMC2-205ENST00000493955 MYDGFQ969H8 173 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 PHYHIPLQ96FC7 376 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 AURKBQ96GD4 344 aaPredicted RBP4.27□□□□□ -1.73
SMC2-205ENST00000493955 JSRP1Q96MG2 331 aaPredicted RBP4.27□□□□□ -1.73
SMC2-205ENST00000493955 C8orf33Q9H7E9 229 aaPredicted RBP4.27□□□□□ -1.73
SMC2-205ENST00000493955 KCNJ16Q9NPI9 418 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 TUBG2Q9NRH3 451 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 MYEF2Q9P2K5 600 aaKnown RBP4.27□□□□□ -1.73
SMC2-205ENST00000493955 NUFIP1Q9UHK0 495 aaKnown RBP4.27□□□□□ -1.73
SMC2-205ENST00000493955 HEBP2Q9Y5Z4 205 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 SYNMO15061 1565 aa4.27□□□□□ -1.73
SMC2-205ENST00000493955 KDM5DQ9BY66 1539 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 ATRXP46100 2492 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 MBD5Q9P267 1494 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 DEPDC5O75140 1603 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 TRDMT1O14717 391 aaKnown RBP4.26□□□□□ -1.73
SMC2-205ENST00000493955 FCN3O75636 299 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 HLA-HP01893 362 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 PLEKP08567 350 aaPredicted RBP4.26□□□□□ -1.73
SMC2-205ENST00000493955 HRH1P35367 487 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 DAOAP59103 153 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 NDPQ00604 133 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 SP4Q02446 784 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 PSMD5Q16401 504 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 GUCA2BQ16661 112 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 MBOAT1Q6ZNC8 495 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 NUBPLQ8TB37 319 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 DTX3LQ8TDB6 740 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 OR2M2Q96R28 347 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 ZYG11BQ9C0D3 744 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 SLC7A5P2Q9GIP4 190 aa4.26□□□□□ -1.73
SMC2-205ENST00000493955 CLSTN2Q9H4D0 955 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms